Castanea sativa (European chestnut): 142605602
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Entry
142605602 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142605602 isoform X1
KO
K23288
syndetin
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142605602
Membrane trafficking [BR:
csaa04131
]
Protein recycling
Others
EARP complex
142605602
BRITE hierarchy
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GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
APOBEC4
Motif
Other DBs
NCBI-GeneID:
142605602
NCBI-ProteinID:
XP_075633138
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Position
8:complement(43151656..43207906)
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AA seq
1131 aa
AA seq
DB search
MQPNLFPFGTVLGNPYLFNGDLSEGLDSSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRS
ARSLGLLPSTSDRPEVPPRAAAAAAVAHALAGLPPHQRFNLSSSSEELRSIYGIGTRSQG
QVVELEEDFYEEDFDPVRHILEHIPSDENDLTFFEKQAALRLAQLDKVAERLSHHVMEHH
EVMVKGMNLVRELEKDLKIANVICMNGRRHLNSSVNEVSRDLIVNSNSKKKQALLDMLPI
LNELCHALNMQAALESLVEEGDYCKAFQVLSEYLQLLDSFSELLAVQEMSRGVEVWLEKT
LQKLDSLLLGVCQEFKQEGYITVVDAYALIGDVSGLAEKIQSFFMQEVLSETQTVLKNIV
QEDQEVLLQNSRLTYSDLCLRIPESMFRQCLLTTLAVLFGLMCSYYEIMGFQLDDKDSAD
QTSSMKQKENDFLWSSGEVQQIDSDARNSSNCQGVNGSLSVSVDRKPGSSMEESTTNGCL
VEFNRTTQLSSLDSQDVVDETRRDDSTASSSGSPQYQLRKDATEYVSQMLQRGRKNLWQL
TTSRVSVLLSSTAVCSTSIHQFLKNYEDLNVFILVGEAFCGVEAVEFRQKLKGVCENYFV
AFHRQNIYALKMVLEKENWLKLPPDTVQMISFAGLVGDGAPLIVPSVGKSSNARVRSSDK
SASLVDANAKKSGFLHWLKCGNPFLLKVAHNSKEGRNSSLLNGAVCSDFDGNNSENSHDE
KFSPRKSDVNHTNGSNSVSEDENEDLLADFIDEDSQLPSRVSKPNVSRSDPAHLKDVEVT
AQTGSSVCLLRSMDKYARLMQKLEIVDIEFFRGICQLFGIFFYFLFETFVQQNPSSSGKS
FSESLNYRLKTALSRITQDCDQWIKPPSSSPTSLSTSFMHADITPTSPPSTKFGHLPGTS
FGLKERCAGADTLFLVARILHKSKAHLQVMLLQNNATIVEDFYVHVVDAVPDLVDQIHRT
TVKLLLHINGYVDRVANAKWEVKELGLEHNGYVDLLLGEFKHFKTRLAHGGLRKEVQDLL
LEYGLEIVAETLIEGLSRVKRCTDEGRALMSLDLQVLINGLHHFVPIDVKPKLQMVETFI
KAYYLPETEYVYWARTHSEYTKSQIVGLVNLVATMKGWKRKNRLDVLEKIE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatctgttcccgttcggcaccgttttgggaaatccgtacttgttcaatggc
gatttgagcgaagggctcgatagctctagggttttcttcttggtcccctttttgttgttc
caaggaggcggaatggatttgtccaaggtcggcgagaagattctcagttccgttaggtcc
gccagatcgcttggacttcttccttctacttccgatcgacccgaggttcctcctcgagct
gcagcagcagcagctgttgctcatgctcttgcagggctgcctccacatcaaaggtttaat
ttgtcatcaagttctgaagagctgagatcaatatatggaattggaaccagatctcaaggt
caagttgtagagttagaggaagacttctatgaagaggactttgatccagttaggcatatt
ttagaacatattccatctgatgaaaatgacctgacattttttgagaaacaggcagctctt
agattagcacaactggataaagtagcagaacgtttgtcccaccatgttatggagcatcat
gaagtaatggtgaaggggatgaatctagtcagggaattggagaaagatttaaagattgca
aatgtcatctgcatgaatggaagaaggcacctgaactcatcagtgaatgaggtttcaagg
gatctcattgtaaattctaattccaaaaagaaacaagctcttctggacatgcttccaatt
ttaaatgagctttgtcatgcactaaacatgcaagcagcacttgaatcacttgtggaggaa
ggagattattgcaaggcattccaagttctatctgagtatttgcagctcttggatagtttt
tcagagctgttggcagtacaagagatgagccgtggcgtagaggtttggcttgaaaaaacg
cttcaaaagctggattcccttttactaggagtttgccaggagttcaaacaggagggctat
ataacggtagttgatgcttatgcattaattggggatgtctctggtcttgctgaaaagata
caaagcttctttatgcaggaggttctttcagaaacacagactgtgttgaagaatatagtg
caagaggatcaggaagtactattgcaaaattctagacttacctacagtgatctatgcctt
cggatacctgaatctatgtttaggcagtgtttgttaacaacactagctgtcctatttggg
ttgatgtgttcttattatgaaattatgggctttcagctggacgataaggattcagcagac
caaacttcaagtatgaagcagaaggaaaatgatttcctttggagttctggagaggttcaa
caaattgattcagatgctagaaattcttccaactgccaaggagtcaatggctctctctct
gtatctgtagacagaaagcctggttcatctatggaggaatctacaaccaacggctgtttg
gttgagtttaatagaactactcaattgtctagtttggattctcaagatgtagttgatgag
actagaagggatgacagtacagcatctagtagtggatccccacagtatcaactgcggaaa
gatgctacagaatatgtttcacaaatgcttcagagaggtcggaagaatctttggcaactc
acaactagtcgtgtatctgtcttgctttcttctactgctgtttgttcaacaagcatccac
caatttttgaaaaattatgaagatctgaatgtcttcatcttggttggggaagccttctgt
ggtgttgaagcggttgagttcaggcagaagttaaagggtgtttgtgaaaattattttgta
gcatttcatcggcaaaatatttatgccctgaaaatggttttggaaaaggagaattggctg
aaattgccaccagatacagtccaaatgattagttttgcggggcttgtaggtgatggagca
cccctaattgttccatctgttggaaaatcaagtaatgccagggtgcgttcttctgataaa
tcagccagcttagttgatgccaatgcaaagaagagtggatttttacattggcttaaatgt
ggaaacccctttttgctaaaagtagcacacaattccaaagaaggtcgcaattcttcccta
cttaatggggctgtctgcagtgattttgatgggaataatagtgaaaattctcatgatgag
aagttctctccacgaaagagcgatgtaaatcatactaatggctctaattctgtttctgaa
gatgaaaatgaagatcttcttgcagactttattgatgaggacagtcaacttcctagtcga
gtttctaaacccaatgtttcaagaagtgaccctgcccatttgaaagatgtagaggttaca
gctcaaactggatcctctgtttgtcttctaaggtcaatggataaatatgcaaggcttatg
cagaaattggaaatagtcgatattgagtttttcaggggaatatgccagttgtttggcatt
tttttctattttttatttgaaacatttgttcagcaaaaccccagttcaagtggaaagagc
ttctctgagtctcttaattatcggctaaagacggccttgtccagaataacacaagattgt
gaccagtggataaaacccccatcctcttcacccacatcgttgagcacatcatttatgcat
gcagatattacacctaccagtcctcccagtacaaaatttggtcacctcccaggaacaagt
tttggtctcaaggaaagatgtgcaggtgctgatactttgtttctcgttgctcgaatactg
cataaatctaaagctcatctccaagtgatgcttctgcaaaataatgcaactatagttgaa
gatttttatgtgcacgtggtggatgctgtgccggatcttgtagaccaaattcataggaca
actgtgaaacttcttcttcacattaatgggtatgttgatcgggttgccaatgctaagtgg
gaagtgaaagagcttggactagagcataatggatacgttgatttattgttgggagaattt
aagcactttaaaacaaggcttgctcatgggggactacgcaaagaggttcaagacctcctc
ttagaatacggacttgaaattgttgcggaaactcttattgaaggtctatcacgagtgaaa
agatgtactgatgagggacgagctctgatgtcattggatcttcaggttttaattaatggc
ttgcatcattttgtccctatagatgtaaagcctaaattacagatggtcgaaacctttatt
aaggcatactacctacctgaaactgaatatgtatactgggcacggactcattctgaatac
actaaaagtcaaattgttgggctagtcaaccttgttgcgacgatgaaaggttggaagaga
aaaaacaggttggatgtactggaaaagatagagtga
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