Castanea sativa (European chestnut): 142605612
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Entry
142605612 CDS
T11266
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
142605612
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csaa01002
]
142605612
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142605612
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
142605612
Peptidases and inhibitors [BR:
csaa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
142605612
Ubiquitin system [BR:
csaa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
142605612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
ubiquitin
Nitroreductase
GMP_PDE_delta
HTH_CDT1
pP_pnuc_2
Motif
Other DBs
NCBI-GeneID:
142605612
NCBI-ProteinID:
XP_075633154
LinkDB
All DBs
Position
8:complement(38725255..38751502)
Genome browser
AA seq
1118 aa
AA seq
DB search
MTVMTPAPIDQQEDEEMLVPHSDLAENNHQPMDVVAQTETASTVENQPVEDPPSSRFTWR
IDNFSRLNLKKHYSEVFVVGGFKWRVLIFPKGNNVDHLSMYLDVADSSSLPYGWSRYAQF
SLAVVNQIHHKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDSVIIEAEVL
VRRVVDYWTYDSKKETGFVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDLPSA
SIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEHYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
VKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRDSDKDKIICNVDEKDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLVEQIGRDIYFDLVDHDKVRSFRI
QKQMPFNLFKEEVAKDFGIPVQFQRFWLWAKRQNHTYRPNRPLTPMEETQSVGHLREVSN
KVHNAELKLFLEVEHGPDLRPISPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKP
LEILTKLNEMAGYTPDEEIELYEEIKFDPHVMCEAVDKKCTFRASQLEDGDIICFQKSSP
VEGGEQLRYPDVPSFMDYVHNRQVVHFRALDKPKEDDFCLELSKLHTYDDVVERVAQQLG
LDDPSKIRLTPHNCYSQQPKPHPIKYRGVEHLSDMLVHYNQTSDTLYYEVLDIPLPELQG
LKTLKVAFHHATKEEVVVHTIRLPKQSTVGDVINDLKTKVELSHPNAELRLLEVFYHKIY
KVFPPSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTAQNQMQIQNFGEP
FFLVIHEGETLAEIKERIQKKLQIPDEEFAKWKFAFLSLGRPEYLQDSDIVSNRFQRRDV
YGAWEQYLGLEHSDNAPKRAYTASQNRHTFEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgactcctgctcctattgatcaacaagaggatgaagagatgctcgtgccg
cactccgatttagctgagaacaatcaccaaccaatggatgttgtagcacaaactgaaact
gctagtactgtggagaaccagccagtggaggatcctccgtcatcgaggttcacgtggagg
attgacaacttttctaggctgaatttgaagaagcactattcggaagtatttgttgttggt
ggttttaaatggcgtgtgcttattttcccaaagggaaacaatgtggaccacttgtctatg
tatttggatgttgccgattcatcaagtttgccttatgggtggagtagatatgcacagttt
agcttggccgtggttaatcaaattcatcataagtactcagtcagaaaagacacacaacat
cagttcaatgcgcgagaaagtgattggggcttcacgtcctttatgcctcttggtgaactg
tacgatcctagtagaggttatcttgtcaatgattctgtcataattgaagctgaggttcta
gttcgtagggttgtggattattggacttacgactcaaaaaaggagactggttttgttgga
cttaagaaccaaggagcaacatgttacatgaactcacttcttcagactctattccatatt
ccttattttaggaaggctgtgtaccatatgccaacaactgaaaatgatttgccatcagct
agcattcctttggctctgcagagcctattttacaagctccagtacagtgacaacagtgtt
gcaacaaaagagctgaccaagtcttttggatgggacacatatgattcttttatgcagcat
gatgtgcaagaacttaatagggttctttctgaaaaacttgaagacaaaatgaagggaact
gttgtagagggaacaatacagaagttatttgaagggcatcatatgaactacattgaatgc
attaatgtggattacaaatcaacaagaaaggaatcattttatgatcttcagcttgatgtc
aaaggttgtcgggatgtttatgcctcatttgataaatatgtggaagtcgaacgtcttgag
ggtgataataaatatcatgctgaacactatggattgcaggatgctaagaagggggtgttg
ttcattgacttccccccggtacttcaacttcagttaaaacgatttgaatatgattttatg
cgggacacgatggtgaagataaatgatcgttatgagttcccattggaacttgaccttgat
cgggagaatggcaaatatttatcacccgatgctgatagaagtgttcgtaatctttacacg
cttcacagtgttttggtacacagtggcggggtgcacggaggacattattatgcatttatc
aggccgactctttctgatcagtggtacaaatttgatgatgaaagggtaacaaaagaagat
gtgaagagagcattggaggagcagtatggtggtgaagaagagttaccacagacaaatcct
ggattcaataacactccttttaaatttaccaaatattcaaatgcatacatgctggtgtat
atacgtgacagtgacaaggacaagataatctgtaatgtggatgagaaggacattgcagaa
catcttcgggagaggttgaagaaagaacaagaagaaaaagaacataaaaagaaagaaaaa
gcagaggcacacctttatactattataaaggttgcacgagatgaagatctggtagagcag
attggtagggatatatattttgatcttgtggatcatgacaaagtccggagctttcgtatt
caaaagcagatgccgtttaaccttttcaaggaggaggttgctaaagattttggaatacca
gttcaatttcagcgtttttggttgtgggcaaagcgtcaaaaccatacatatcgcccgaac
cggccattaacgcctatggaggaaactcaatctgttggacacttgcgggaggtgtcaaat
aaggttcacaatgcagaacttaagttgttcttggaagtagagcatggcccggatttacgc
cctatttctccacctgataagacaaaggatgatattttgcttttcttcaagctatatgat
cctgagaaagaagaactccgttatgttgggaggctttttgtgaagagtactggtaagcca
ttagaaatcttaacaaaattaaatgaaatggctggctatactcccgatgaagagattgaa
ctttatgaggaaattaagtttgatcctcatgtcatgtgtgaagccgttgacaagaagtgc
acgtttcgagccagccagcttgaagatggagacatcatttgctttcaaaaatcttctcca
gttgaaggtggtgagcagttacgctatccagatgttccctcatttatggattatgttcac
aatcgccaagttgttcattttcgagctctggataaacccaaggaggatgatttctgtcta
gagctgtcaaaacttcatacttatgacgatgttgtagaaagagtagcgcagcaacttggt
ttggatgatccatccaaaatcaggctaacccctcataactgttactctcaacaacccaaa
cctcaccctatcaagtaccggggggtagagcatttgtctgatatgctagtccactacaat
cagacttcggatacattgtactatgaagtattggacatccctctaccagaattacaaggt
ttgaaaactctgaaagtagcttttcatcatgctaccaaagaagaagttgtggttcatact
ataagactgccaaaacagagcacagttggagatgtaattaatgatcttaaaacaaaggtg
gagttgtctcatcctaatgcagaacttcggctgcttgaagttttctatcacaagatctac
aaggtttttcctcctagcgaaaagattgagaacataaatgatcaatactggacattacgg
gcagaagagatcccagaagaagagaaaaatcttggtcctcatgatcgcctaatacatgtg
taccatttcacaaaagatacagctcagaaccagatgcaaattcagaactttggggaaccg
tttttcttggtcatacatgagggtgagactctggctgaaattaaagagcgaatacagaag
aaattacagattccagatgaggaatttgccaagtggaagtttgcatttctttctctaggt
cgtccagagtaccttcaggactctgacattgtgtccaatcgttttcagagaagagatgtt
tatggtgcttgggagcagtatcttggattggagcactctgacaatgctcctaaaagagct
tatacggctagtcagaaccgtcacacatttgagaagcctgtaaaaatttacaactag
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