Castanea sativa (European chestnut): 142605705
Help
Entry
142605705 CDS
T11266
Name
(RefSeq) putative CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142605705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142605705
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142605705
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
142605705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
ScoMcrA_N
Motif
Other DBs
NCBI-GeneID:
142605705
NCBI-ProteinID:
XP_075633253
LinkDB
All DBs
Position
8:46372904..46374054
Genome browser
AA seq
277 aa
AA seq
DB search
MISEKQKPITIREVWAGNLESEFELIRDVIDRYPYISMDTEFPGLVFRPSVDPSKPYYYR
PLQPSDHYRVLKSNVDVLNLIQVGLTLSDAAGNLPDLGSGNRFIWEFNFKDFDVARDPHA
PDSIALLMRQGIDFERNREEGVDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKIL
TRRSLPSELDEFLKVLRVFFGNRVYDVKHMMRFCNSLYGGLDRVARTLEVDRAVGKCHQA
GSDSLLTWHAFQKMRDVYFVNDGPEKHAGVLFGLEVY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagagaagcagaaaccgattacgatccgggaagtgtgggctggtaatttagaa
tccgagttcgaactcattcgtgacgtgatcgatcggtacccttatatttctatggacact
gagtttcctggccttgtttttcgaccatctgtggacccatctaagccttactattaccgt
cctcttcagccctccgatcactaccgcgttctgaagtcgaacgtcgacgttttgaacctc
atccaggtcggcctgactctctccgacgccgccggtaaccttcccgacctcggatccggg
aaccggttcatctgggagttcaacttcaaggacttcgacgtggcgcgtgaccctcacgcc
cctgactcgatcgcgttgctgatgcgacaggggatcgacttcgagaggaacagggaggaa
ggggttgactcgtcccggttcgccgagctgatgatgtcttcggggctcgtctgcaacgac
tcggtgagctgggtcacgtttcacagcgcgtacgacttcgggtacctggtgaagatcctc
acgcgccggagcttgccgagtgagctggacgagtttttgaaggttttgagggtgtttttc
gggaacagggtttacgatgtgaagcacatgatgaggttttgtaacagcttgtatggcggt
ctggaccgggtggcgaggacccttgaggtggaccgggctgttgggaagtgccaccaggcc
ggctccgatagcctgcttacgtggcacgcttttcagaagatgagggatgtgtattttgta
aatgatggaccggaaaaacatgctggtgtactgtttggcttggaagtgtattaa
DBGET
integrated database retrieval system
