Castanea sativa (European chestnut): 142607347
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Entry
142607347 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142607347
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03015
mRNA surveillance pathway
csaa04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142607347
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142607347
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csaa01009
]
142607347
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142607347
03036 Chromosome and associated proteins [BR:
csaa03036
]
142607347
Protein phosphatases and associated proteins [BR:
csaa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
142607347
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
142607347
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
142607347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
TOR1L1_N
Adaptin_N
Cnd1
CLASP_N
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
142607347
NCBI-ProteinID:
XP_075634914
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All DBs
Position
8:complement(12263904..12285586)
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AA seq
587 aa
AA seq
DB search
MSMVEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLVMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVREKAVESLCRIGSQMRET
DLVDWFIPLVKRLAAGEWFTARVSACGLFHIASPSAPEMLKTELRSIYSQLCQDDMPMVR
RSAATNLGKFSATVESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIINFSQDKSWRVRYMVANQLYELCEAVGPEPTRRDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELSIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAATNNLKRLAEEFGPEWAMQHIVPQV
LEMITNPHYLYRMTILHAISLLAPVMGSEITISKLLPVVINVSKDRVPNIKFNVAKVLQS
LIPIVDHSVVEKTVRPCLVELSDDPDVDVRFFANQALQSVDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgaagaaccactatatccaattgctgtgctcatagacgagctgaaaaat
gatgacattcagctacgattgaactcgattcggaggctatccacaattgcacgtgctctt
ggggaggagcgaaccagaaaggaactgatcccatttcttagtgaaaacaatgatgacgat
gatgaggtacttcttgtgatggcggaggaattgggggtgtttattccatatgttggggga
gtggagcatgcccatgttttgctcccaccgttggagaccctttgcactgttgaggaaacc
tgtgtgagggaaaaagcggtggagtcattgtgtagaattggctctcagatgagagagact
gacttggttgactggtttattcctctggtgaagagattggcagctggtgaatggtttaca
gcacgagtctctgcatgtgggttgtttcatattgcctccccaagtgccccagagatgctg
aagacagaattgcggtcaatatacagtcaattgtgtcaggatgacatgcctatggttagg
aggtctgctgcaacaaatctgggaaaattttctgcaactgttgaatctgctcatctgaaa
actgacatcatgtcaatgtttgaagatcttacacaggatgatcaagattctgttcggtta
ttggccgttgaaggttgtgccgctcttggaaagttgttggaacctcaggactgtgttgca
catattctacctgttatcataaatttctctcaggataaatcttggcgtgtgcgttacatg
gttgctaatcagttatatgaactttgcgaagctgtggggcctgagcctactaggagggac
ttggtccctgcatatgtccggttgcttcgggataatgaggctgaagttcgtatagcagct
gctggcaaagtaactaagttttgccggatattgaatcctgaactttcaattcagcatatt
cttccttgtgtgaaggaattgtcatcagattcttcccagcatgttcgttctgctttagct
tcagttataatgggaatggctcctgtattaggaaaggatgccactattgaacagctcctt
ccaattttcctttctcttctgaaggatgaatttccagatgtacgccttaatattattagc
aagcttgatcaagtgaatcaggtcattggaattgatctgctctctcaatccttgttacca
gccattgttgagcttgctgaggatagacattggagagtaaggctagcaataatagagtat
atacctttattggcaagtcaattgggtgttggattttttgatgacaagctaggtgctctt
tgcatgcagtggttacaggataaggtttactcaattcgtgatgcagctactaacaacttg
aagcgtcttgcagaagagtttggcccggagtgggcaatgcagcacatagttccacaggtt
ttggagatgattaccaatccacattatttgtatcggatgaccattcttcatgcaatttcc
ctccttgccccagtaatgggctcagaaatcacaatttcaaagttgttgccagtggttatc
aatgtatcaaaggacagggtaccgaacatcaagttcaatgtggcaaaggtgctccagtca
ctcatacctatagttgatcattctgtggtggagaagacagttcgtccctgtttggtcgag
ctaagtgatgacccagatgttgatgtccgattttttgccaaccaagcgcttcagtcagtt
gaccatgttatgatgtccagctag
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