Castanea sativa (European chestnut): 142607461 Help Entry 142607461         CDS       T11266                                  Name (RefSeq) protein VACUOLELESS1   KO K20180   vacuolar protein sorting-associated protein 16 Organism csaa  Castanea sativa (European chestnut) Pathway csaa04148   Efferocytosis Brite KEGG Orthology (KO) [BR:csaa00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     142607461  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csaa04131]     142607461 Membrane trafficking [BR:csaa04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     142607461    Hops complex     142607461 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps16_N Vps16_C WD40_WDHD1_1st Motif Other DBs NCBI-GeneID:  142607461 NCBI-ProteinID:  XP_075635085 LinkDB All DBs Position 8:complement(40175981..40188645) Genome browser AA seq 853 aa AA seqDB search MANVSVAAEWQLLGDRYYRKPELYHPMQWRHIDLSRNKVACAPFGGPVALIRDDSKIVQL YSESALRKLRLFNSAGVSLSDVVWKNPGGRLIGLSWSDDHTLVCIVQDGTVYRYNVHAEL IDPNLSILGHDYFDENVVECVFWGNGVVCVTETCKVFAVPDFKTRTVVRLADPPPPPSSE LELELELPHCVAVIEPQYTLSGNVEVLLAIGDGVVMVEEDEVQALPVPPGDGPLQKMVVS GNGRFVAAFTHDGRLAVYSTRFEKMFEYQCESALPPEQLAWCGLDSVLLYWDDMLLMVGP SDEPVRYLYDEPIVLVPECDGVRILTNTSMEFLQLVPNSTVSIFKIGSTSPAALLYDALD HFDRRSAKADENLRLIRSSLPEAVEACVDAAGHEFDVSRQRTLLRAASYGQAFCSNFQRD RIQEMCKTLRVLNAVRNPEIGIPLSIQQYKLLTPSVLIGRLINAHQHLLALRISEYLGMN QEVVIMHWACSKITASLAIPDAALLEILLDKLRLCKGISYAAVSAHADKNGRRKLAAMLI EHEPRSSKQVPLLLSIGEEDTALMKATESGDTDLVYLVLFHIWQKKQPLEFFGMIQARML ARDLFITYARCYKHEFLKDFFLSNGQLQEVAFLLWKESWAIGKNPMAIRGSPLHGPRIKL IEKAHSLFSETKEHTFESKAAEEHAKLIRMQHELEVTTKQAIFVDSSISDTIRTCIVLGN HRAAMKVKTEFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACIEADE KGEALKYIPKLADPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIF DTLRDRLSFQGVS NT seq 2562 nt NT seq  +upstreamnt  +downstreamnt atggccaacgtgtcggtggccgccgagtggcaacttctcggcgaccgttactaccggaaa ccggaactctaccacccgatgcagtggaggcacatcgatctcagccgcaacaaagtcgcc tgcgccccgttcggcggtccggtcgctctcatccgcgacgattccaagatcgtccagctc tactccgagtccgcgctgcgaaagctccgcctcttcaactccgccggcgtttctctctcc gacgtcgtctggaagaaccccggcggtcgcttgatcggtctgtcgtggagtgacgatcat actttggtctgtatcgttcaagacggcaccgtttatcgctacaacgttcacgcggagctg atcgatcccaatctctcgattctagggcatgattacttcgacgagaatgtggtcgagtgc gtgttttggggaaacggcgtcgtttgcgttaccgagacttgtaaggttttcgcggtgccg gatttcaagacgaggacggtggtgaggctggcggatcctccgccgccgccgtcgagtgag ctggaattggaactggagctgccgcattgcgtggcggtgatcgagccgcagtacactctg tccgggaatgtggaggtgttgttggcgattggggatggcgttgtgatggtggaggaggat gaggtgcaggctttgccggtgccgcccggggacgggccgcttcagaagatggtcgtttcc ggcaatgggaggtttgttgcggcgtttacgcacgatggcaggttggccgtgtactcgact aggttcgagaagatgtttgagtaccaatgcgagtcagctcttcctcctgagcagcttgct tggtgtggattagacagtgtgttactttattgggatgatatgcttctgatggtgggtcct tctgatgaaccagtgcgctacctatatgatgaaccaatagttcttgttcccgagtgtgat ggagttaggatattgactaatacaagtatggaatttttacaactggtacctaattccaca gtatccatctttaagattgggagtacatcacctgcagctttactgtatgatgcgttggat cattttgacaggcgcagtgccaaggcagatgaaaatttgagattgataagatcctcattg ccagaggctgttgaagcatgtgttgatgctgctggtcatgaatttgatgtttctcgtcag aggacactactaagagctgcaagctatggtcaggccttttgcagcaattttcaacgtgac cgtattcaagaaatgtgtaaaactctgcgagtcttaaatgctgtgcgcaaccctgagatt ggcatccctcttagtattcagcaatataagttgctcacaccgtccgttctgattggtcgt ttgataaatgcgcaccaacaccttcttgctctacggatatcagagtaccttggaatgaat caagaggtggttataatgcactgggcatgttcaaagataactgcttcattagcaatcccg gatgctgctctccttgaaatcttactggataagctgagattatgcaaaggaatatcctat gcagcagtttctgctcatgcagataagaatggccgccggaaattagctgctatgcttatt gaacatgaaccacgttcttccaaacaggtccctcttcttttaagcataggagaggaagat acagctttgatgaaggcaactgaaagtggtgatactgaccttgtttatcttgttttgttc catatttggcaaaagaagcaaccattggagttttttggaatgatacaggccagaatgtta gcaagggatttgtttataacttatgcacggtgctacaagcatgaattcctgaaggacttc ttcctatcaaatggacaactccaggaggtggcttttcttttatggaaagagtcatgggcg ataggaaagaatcccatggcaatcagaggatctcctctccatggtccacgcataaaactt attgagaaggctcatagtcttttctcagaaacaaaggaacataccttcgagtcaaaggct gctgaagagcatgccaaattgataagaatgcaacatgaattggaggtgactacaaagcag gccattttcgttgattcaagcatcagtgatacaatccgcacttgtattgtattgggaaat catcgagccgcaatgaaagtgaaaacagaattcaaggtttccgagaagagatggtattgg cttaaggtttttgctttggctacaatccgagattgggatgccctggaaaagttttcgaag gagaagagaccgccaattggttacaggccatttgttgaggcatgcattgaagcagatgaa aaaggagaagctctaaaatatatcccaaaacttgctgatcctcgagaaagagctgagtct tatgctcggattggaatggccaaggaagctgctgatgctgcttctcaggccaaagatggt gaattgcttggtagattaaaattgacctttgcacaaaatgcagcagcttcatcaattttc gacactcttagagatagactgtccttccaaggtgtttcatag

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