Castanea sativa (European chestnut): 142607642
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Entry
142607642 CDS
T11266
Name
(RefSeq) AP-2 complex subunit alpha-1-like
KO
K11824
AP-2 complex subunit alpha
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04142
Lysosome biogenesis
csaa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142607642
04142 Lysosome biogenesis
142607642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142607642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142607642
Membrane trafficking [BR:
csaa04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
142607642
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
142607642
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptin_C
Alpha_adaptinC2
Cnd1
Motif
Other DBs
NCBI-GeneID:
142607642
NCBI-ProteinID:
XP_075635324
LinkDB
All DBs
Position
8:43790365..43808150
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AA seq
1019 aa
AA seq
DB search
MALSGMRGLSVFISDIRNCPNKEQERLRVDKELGNVRTRFKNEKGLSPYEKKKYVWKMLY
IYMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTACLLNENHDFLRLAINTVRNDIIGRN
ETFQCLALTMVGNIGGRDFAESLAPDVQKLLISSSARPLVRKKAALCLLRLYRKNPDVVN
VDGWADRMAQLLDERDLGVLTSSMSLLVALVSNNHEAYWSCLPKCVKTLERLARNQDVPQ
EYTYYGIPSPWLQVKTMRALQYFPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMSRMLLVTDVQDIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVTNAKDIVEEILQYLSTAEFAMREELSLKAA
ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAAAKAREYLDK
PAIHETMVKVSAYLIGEFGHLLARRPGCSPKELFSIIHEKLPTVSSSTIPILLSTYAKLL
MHTQPPEPELQNLVWAIFNKYESCIDAEIQQRAVEYFALSRKGAALMDILAEMPKFPERQ
SSLIKKAEDIEVDTAEQSAIKLRALQQTSNALVVTDQRPANGTPPVLGRVMVPSTSSNVD
HHVADQGLSQENGTLTTVDPQPPSADLLVDLLGPLAIEGPPSADVQPQQNIVSGVEGVPN
AVEATAIVPVGEQTNSVQPIGSVAERFQALCVKDSGVLYEDPYIQIGIKAEWRAHQGRLV
LFLGNKNTNPLLSVQAIILPPSHLKLELSLVPETIPPRAQVQCPLEIVNLRPSRDVAVLD
FSYKFGNDMVNCKLRLPAVLSKFLQPIPVSAEEFFPQWRSLSGPPLKLQEVVRGVKPMPL
LDMANLFNSLRLMVSPGLDPNPNNLVASTTFYSESTRAMLCLARIETDPADRTQLRLTVA
SGDPTLTFELKEFIKEQLVSIPTASRAPAPAPAPPAPQPTSPPAAALTDDPGALLAGLL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtcagggatgcgaggcctctcggtgttcatcagcgacatacgcaattgcccg
aacaaagagcaagagcgcctccgcgtcgataaggagctcggaaatgtccgtacacgcttc
aagaacgagaagggtttatccccgtatgagaagaagaaatatgtttggaaaatgctctac
atttatatgctgggttatgatgtggattttggtcacatggaagctgtttctctaatatct
gcgccaaagtatccagaaaagcaggttggttacattgtgactgcatgtttgctaaatgag
aaccatgattttttgagactggcgataaatactgtgcgcaatgatatcattggtcgcaac
gagactttccagtgtttggcattgactatggttggcaacattggcgggagagactttgct
gagtcgttagcacctgatgtccagaagttacttatctctagcagcgccagaccacttgtg
agaaagaaagctgcattgtgtttgctgcgcttgtataggaaaaatcctgatgttgtcaat
gtagatggctgggcggatcggatggcacagttattagatgaacgagatcttggtgttttg
acatcttcgatgagccttcttgttgccttagtatcaaacaaccatgaagcatattggagt
tgtcttccaaagtgtgttaaaacattagagcggcttgccaggaaccaggatgttccacaa
gaatacacttactatggtatcccatctccctggcttcaggttaagacaatgagggctctt
cagtattttccaactattgaagatccaaataccagaagatcattgtttgaggtcttacaa
cggatattaatggggactgatgttgtgaaaaatgtaaataagaacaatgcatcacatgct
gttctctttgaagcccttgctctagtcatgcatcttgatgctgaaaaagagatgatgtct
cagtgcgttgcccttcttggaaaatttattgctgtgcgtgaaccaaatattcggtatctt
ggcttggagaatatgagtcggatgttattggtaacagatgtgcaagatatcatcaaaaga
catcaggctcagatcataacctcattgaaggatcccgacatcagtattcgtaggcgtgct
cttgatttgctttatggtatgtgtgatgttacaaatgcaaaggacatagttgaagaaata
ctgcagtatctcagtacagcagaattcgcaatgcgtgaggaattgtcacttaaagctgct
attcttgcggagaagtttgcccctgatctatcatggtatgtggatgtgattcttcaattg
attgacaaggctggggattttgttagcgatgacatatggtttcgtgttgtgcagtttgtt
acaaacaatgaagacctacagccttatgcagcagcaaaagccagagagtatcttgacaag
cctgctatacatgagactatggtgaaggtcagtgcatatctcattggagaatttggacac
cttttggccagacgacctgggtgtagtccgaaggaattattcagcatcatacatgagaag
cttcctaccgtatcgtcttctaccattccgattcttctttcaacatatgctaaactttta
atgcacactcaacccccagaaccagaactacagaatctggtttgggcaatatttaacaaa
tacgagagttgcattgatgctgagatacaacaacgagctgtagaatattttgccttgagt
aggaaaggtgcagctctaatggatatattggctgaaatgcccaaattccctgagcggcag
tcctcattgatcaagaaggctgaagatattgaagttgatactgcggaacaaagtgctatt
aagttgcgggcactgcagcaaacatcaaatgctctggttgtaactgaccagcggcctgcg
aatgggacacctcctgtgcttggtcgggtaatggtgcccagcacgagcagtaatgtggat
catcatgtagcagatcaaggattgtcccaggagaatgggaccttgactacagtagatccc
caacctccatcagccgatctccttgttgatctcttgggtccactggctattgaaggccct
cctagtgctgatgtccagcctcaacaaaatatagtctctggagtggaaggtgttccaaat
gcagtggaagccacagccatagtacctgttggagagcagacaaattctgttcagccaata
ggaagtgttgctgaaaggtttcaagcactgtgcgtgaaggatagtggtgttctatacgag
gatccttatatccagattggcattaaagcagaatggcgagcacatcaggggcgtcttgta
cttttcttgggaaacaagaatactaatccactactttcagttcaggctataatattgcct
ccatcccatttgaagttggagctctcattagtcccagaaactattcctccgagggcacag
gtgcaatgcccacttgaaattgttaatctccgccctagtagggatgtagcagttcttgat
ttctcctacaagtttggtaacgatatggttaactgcaagctccgtcttcctgctgtattg
agtaaatttcttcagcctataccagtgtctgctgaagagtttttccctcaatggagatca
ctttcaggaccgcctttgaagcttcaagaagtggttagaggcgtaaaaccaatgcctctt
ctggacatggcaaatttattcaacagtttacggttgatggttagtccagggcttgaccca
aatccaaacaatcttgtagcaagtacaacattctattcagaaagtacaagggccatgctc
tgtttggctagaattgaaacagatccagcagaccgaacccaattgcgtttgacagttgct
tcaggggaccccacattgacatttgagttgaaggagttcatcaaggagcaattagttagt
attcctacagcctcccgtgctcctgctccagctccagcgccaccagcacctcaaccaacc
agtccaccagcagcagcattaacagatgatcctggggctttgctggctggcttactttga
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integrated database retrieval system
