Castanea sativa (European chestnut): 142607719
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Entry
142607719 CDS
T11266
Name
(RefSeq) zinc finger CCCH domain-containing protein 24
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142607719
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
142607719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
zf-CCCH
Methyltransf_25
Methyltransf_15
RRM_1
Methyltransf_4
Ubie_methyltran
MTS
Methyltransf_11
PCMT
Torus
PrmA
zf-CCCH_2
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
142607719
NCBI-ProteinID:
XP_075635431
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All DBs
Position
8:35066987..35075528
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AA seq
888 aa
AA seq
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MEPAMAASPNNELSPIETLNSPPSTPPQMDGHESITTTTITTTATTTITTQSQLDSNQEP
LSNPESSAAALPPLPLPVPDEAVSGEKRKREEELPPLWKTSLCSYFRRDSGSCSHGDACK
YAHGEEELRPRPDNTWDPTSDRAKKAMRSETTTTTTTKKKSEVCEAEIMMTEALIDDNNN
GGGGGGCLDPELSKCLVHLPRKWNSQNLTSFLGEQAIQFKSVKKKKGMTVGFVTFENAEQ
LKTAQEELKGKSIGNKILKVADVIPRSFDKKIRSTMTLPLNGQQTGEPSLDGENTGVSIS
SNGVEDGDTNDDEKHGSTVDGSVARARSVRDVVTPLAHMPYSDQLEHKKTSLMQNLKKLT
RNARKACPHGVSLPEWILKSREIGGLSCKLEGILESPLVNGYRNKCEFSVGYSLQGKATV
GFMLGNFREGVTAVEEPVDCPNVSRIACKYASIFQDFLQQSELPIWNRFKNIGFWRQLTV
REGRTPGKVVDVENSDASISEVMLIVQVCSVGLDDAVVTGEFERLAQSFAAGAIANSPSL
PLTALVVQDHQGISNAAPADAPLRQLPIPKAASAKLETNDVAEARIHDSISNLQFCISPT
AFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAV
SDAYRNAEINGIKNCKFVCAKAEDVMGSLLKEYLNVPQKPDEISNTSENSDKENTTAGEK
DTSIDAVLDPEESSSHDLINNKSASGCSENEEQEAGSQLQKNCTSESGNTSVQQFKNVVA
IVDPPRVGLHPIVIKALRTHPRLRRLVYISCNPESLVANAIELCTPSPESIEKGNKNNRG
WRNMSGTGLARHRAKSMPPSEPFQPVKAMAVDLFPHTVHCELVMLLER
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagcaatggcggcttctccaaataacgaactctctccaatcgaaaccctaaac
tctccaccgtccactcctccccaaatggacggccacgagtccatcaccaccaccaccatc
accaccaccgccaccaccaccatcaccactcaatctcaactggacagcaatcaagagcca
ctctccaatccagaatcatcagcggcagcattgccgccattgccgttgccagtgccagac
gaagccgtatcgggcgagaagcgaaagcgagaggaggagctaccgccgctgtggaagacg
agcctctgctcctacttcaggcgggactcagggtcctgcagccacggcgacgcgtgtaag
tacgcgcacggcgaggaggagctccgtccgcgccccgataacacgtgggacccgacctct
gaccgtgcgaagaaggccatgaggtctgagacgacgacgacgacgacgacgaagaagaag
agcgaggtttgcgaagcggaaatcatgatgactgaggcgcttattgacgacaacaacaat
ggtggtggtggtggtggttgcttggaccctgagcttagcaagtgcttggttcatttgcct
aggaaatggaactcccagaatttgactagctttcttggtgaacaggcaattcagttcaaa
tctgtgaagaaaaagaaaggcatgactgtaggttttgtgacttttgaaaacgcagaacaa
ttgaaaactgcacaggaggaattgaaaggaaaatctattggcaacaaaattttaaaggtt
gccgatgtcattcctcgctcatttgataagaaaattagatcaacaatgactctcccttta
aatggacaacaaactggggaaccttcactggatggtgagaatacaggggtctctatatct
tcaaatggggttgaggatggtgatacaaatgatgatgagaaacatggttcaacagttgat
ggctctgttgcaagggcaagaagtgtccgcgatgttgtgactccccttgctcatatgcct
tatagtgatcagttggagcacaaaaagacctcccttatgcaaaatctcaaaaaacttact
agaaatgcacgtaaagcttgtccccatggtgtttcgcttccagaatggattctcaaatct
agggaaataggtggtctttcatgtaaactagagggcattcttgaatcaccacttgtaaat
ggatatcgaaataagtgtgagttttcggttggatattctctgcagggcaaagcaacagtg
ggatttatgctcggcaactttagggagggcgtgacagcagtcgaagaaccggtggattgc
ccaaatgtttcaagaattgcttgcaaatatgcttctatctttcaggactttttgcaacaa
tcagaattaccaatttggaacagatttaagaatattggattttggcgtcaattaacggtt
cgagaaggaaggacccctgggaaggttgttgacgttgaaaattctgatgccagcatttca
gaggtcatgcttattgttcaggtttgctctgtgggccttgatgatgctgttgtaactggt
gaatttgagaggctggctcaatcatttgctgcaggagctattgcaaattctccatctttg
cctctaacagctttggttgttcaggatcaccaaggaatatcaaatgctgcaccagctgat
gctccattgcgccaactgcccattccaaaggctgctagtgctaaactggagaccaatgat
gttgcagaggctagaattcatgactctataagcaatcttcagttctgtatatctcccaca
gcttttttccaggttaatactcttgctgctgagaagctatattcgcttgctggggattgg
gctggtctgggtcctgatacattgctatttgatgtatgctgtggtactggaacaataggg
ctgactttagcacatcgtgttggtatggttattggcattgaaatgaatgcttctgcagtt
tcagatgcttacaggaatgctgaaataaatggcattaaaaactgtaaatttgtttgtgca
aaggcagaggatgtgatgggatcattattgaaagagtacctaaatgtgcctcagaagcct
gatgagatttcaaatacttctgaaaatagtgacaaagaaaacactactgctggagagaaa
gatacctcaattgatgctgtactagaccctgaagagagctcaagccatgatcttataaat
aacaaaagtgcttctggttgttcagaaaatgaagagcaagaagctggaagccagctccag
aagaattgcacttctgaaagtggaaatacttctgtgcagcagtttaaaaatgttgttgct
attgttgatcctccacgtgttggactacatcccatcgtgataaaagctctgagaactcat
cctcgtctgcggaggcttgtttacatttcctgtaatcctgaaagtttggtggcaaatgct
attgaactttgcacaccatctcctgagagtattgagaaagggaataaaaacaaccgggga
tggagaaatatgagtggtactggtctagcacggcacagagccaagtctatgcccccttca
gagcctttccaacctgtaaaagccatggctgttgatcttttcccacatactgtgcactgt
gaactggtgatgctcctagaaaggtag
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