Castanea sativa (European chestnut): 142607786
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Entry
142607786 CDS
T11266
Name
(RefSeq) axial regulator YABBY 5
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142607786
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
142607786
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Ortholog
Paralog
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
Ccdc124
HMG_box
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
142607786
NCBI-ProteinID:
XP_075635533
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All DBs
Position
1:complement(77579456..77583924)
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AA seq
188 aa
AA seq
DB search
MSSCIDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCANLWSVNMAAAFQSLS
WQDAQAPHPITPDHRNDYSSSSSSKCNSKIAMRAPITNNATEERVVNRPPEKRQRVPSAY
NQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKLDKASEKHLT
SRAALLNN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctgcatcgatgttgcgcctgagcaactctgctacatcccctgcaacttttgc
aatatcgttcttgcggtcagtgttccatgcagcagcttgttggacatagtgaccgtccga
tgtgggcactgcgccaatctatggtccgtgaacatggccgccgcttttcagtcactgtca
tggcaagatgctcaggcaccacaccccatcacacctgatcacaggaatgactactcaagc
tcttcctcttccaaatgcaacagcaagattgcaatgcgagcaccaataaccaacaatgcc
actgaggaaagggttgtgaatcgacctcccgagaagaggcagcgagtaccatccgcatac
aatcagtttataaaagaggagatccagaggatcaaggccaataatccggatattagccac
agggaagcatttagtactgcagcaaaaaattgggcacacttccctcatattcatttcggg
ctgatgttggagaccaacaatcaggctaagctggacaaagcctctgagaagcatctaacg
tcaagggctgcactactgaacaattga
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integrated database retrieval system
