Castanea sativa (European chestnut): 142607793
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Entry
142607793 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142607793
KO
K13095
splicing factor 1
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142607793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142607793
Spliceosome [BR:
csaa03041
]
Complex A
Other components
Complex A specific factors
142607793
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_1
SF1-HH
Ras
Motif
Other DBs
NCBI-GeneID:
142607793
NCBI-ProteinID:
XP_075635538
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Position
8:49164090..49170522
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AA seq
841 aa
AA seq
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MSAKVDTTSAVEISGTKMSGTTASSVTPSSSQKVSKFAAKSGFVIPKNKLSGSLVPIFRV
KKLEGGDAADEESTKVVQRKTKWGPDLTQDAAVKRGRALAYQTRVDQITQQLILGSLEAG
DTQDSSITAENLDHRSPSPQRNSKKSELLEVEKREAIGELLKLNPSYKVPPDYKPLLKES
RVPIPVKEYPGFNIIGLLFGPGGENQKRLEKETGAKIQVYGNKAETGEKGEIKPSDGNEV
QGAYEELYVQISAETFEKVDAAVSIVELLVSSVSGNLAAVSTASTSVSGDNSDVLTQRQD
AATSHMFPTGVVHQGALQSEARPTQTPLQGQFQFPGLWFPSGQSHSAMHASPGLFPPNPS
APGLNNYVHLSSSPLNPSNMPSLFGPRPTPMVGFNSILQNPPAVPPRPQPPTQVLQNPYM
GGPFGHIGQHRNLSMPALQPSSAQPNVSGPFPFTSSQPPPTRPLMVSLPQPMSGIQPRSI
SDRPLTPSGSSTVWSAHGSASVSLGLSNMGQMAPPNRPHPQNPQPGVASMAPPSNMSTAS
LGSPVIFPQPSTPQFSSNVANRPFATPHFALNPPPQGGNPASFSASLHQTQAPNSSTNPG
LGSAPIPSPSSTQPPLPLQAGRPNSVSGSTTNFTSIKPPMVTAPSSGDFTFQPHRPQNPV
SQTVPTAISSQPASQSTLQMQPPTTQAPSFHLAMPKITPQPGNQVFQRPQFSNPVGQPQA
PVSAVPYSGSQAPTGPPRLPAYPNASVAPRTPLPQMGPRSFNPAPQMPNLPGPILPRPGN
SLQLQQNYPARPTRPEIHLAPNQQFSNTFAFASGKPGSKPGGQQIYDPFSPTSVPTSKSE
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaggttgacacgacatctgctgttgagatttccggtactaagatgtctgga
acaactgcttcgtctgtaacaccatctagtagccagaaggtttccaagtttgctgcaaaa
tctggatttgttataccaaaaaacaaattatcaggctcattagttccgatttttcgagta
aaaaagctggaaggtggtgatgcagctgatgaggaaagtaccaaagtggtgcagaggaaa
acaaaatggggccctgatctcacacaggatgctgcggtcaaaaggggaagagccttagct
tatcagacgagggtggaccaaattacgcaacagctaatattgggatctttggaggctggg
gacactcaagactcatcaataacagctgaaaacttagatcacagatctccaagtcctcaa
agaaatagcaagaagtcggagctattggaagttgaaaagcgggaagccataggtgaatta
ttgaaactgaatccaagttacaaggtcccacctgattataaaccattgttgaaggagtca
agagttccaatccctgtcaaagaatatcctgggttcaacattattggcctactatttggg
ccgggaggcgagaatcaaaagcgattagaaaaagaaactggagccaaaatacaagtttat
ggtaacaaagcagagacaggagagaagggagaaattaaaccatctgatggaaatgaagtt
cagggtgcatatgaagagttatatgttcaaatatcagctgaaacatttgagaaagttgat
gcagcggtttctattgttgaactgctagtctcctcagtatcaggaaatttggctgctgta
tccacagcatctacatcagtttctggggataatagtgacgttctcactcaaagacaagat
gcagccacctcacacatgtttcctactggtgtagtacaccagggagcactgcaatcagag
gccagacctacgcaaactcctttacaaggtcaatttcaattccctgggctgtggttccca
tcaggtcaatctcacagtgcaatgcatgcatctcctggcctctttcctccaaatccttca
gcaccaggtctcaacaattatgtccatttatcctcatcacctttgaatccttcgaacatg
ccttctttgtttgggcctcgaccaactccaatggttggattcaactcaattctccaaaac
ccacctgccgttccacctagaccacagccaccgacacaagttctacagaatccttacatg
ggaggtccttttggacatattggccaacacagaaatctttccatgccagcgttacagccc
tcatcagctcagcctaatgtttcaggtccatttccatttactagtagccaacccccacca
acaaggcctttaatggtttcacttcctcaaccaatgtctggcattcaacccagatcaata
tctgaccgacctctgaccccttctgggagctctactgtatggtctgcccatggtagtgct
tcagtatctctaggtctgagtaacatggggcagatggctccacccaaccggcctcatcct
caaaatccacaaccaggtgtggcatctatggcaccaccttcaaatatgtcaacagccagt
ttgggttcacctgtcatctttcctcagccatccactccccagttttccagtaatgttgcg
aaccgtccttttgcaaccccacattttgcattgaatccaccacctcaagggggaaatcca
gcttcattttcagcttctctacaccaaacacaagcacctaattcatctacaaacccagga
ttgggatctgcaccaattccttcaccatcatccacacaaccacctttacctctgcaagca
ggaagaccaaattctgtttctggaagtacaacaaacttcacttccataaaaccaccgatg
gtgacagctccaagttctggtgattttacttttcaacctcaccggccgcagaatccagtc
tctcaaacagttcccactgcaataagcagtcaacctgcaagtcagagtactctgcagatg
caacctccaacaactcaggcaccatcttttcacttggctatgcccaaaataacacctcaa
cctggcaatcaagtctttcaaaggccacagttcagtaatccagtaggtcagccgcaagca
ccggtatctgctgttccctattccggaagccaagcgccaacaggtccacccagacttcca
gcatatccaaatgcaagtgttgctcctaggactccactcccacaaatgggcccaaggagc
tttaatccagctccacaaatgcccaatttgcctggtcctatccttcccaggccggggaat
tctctgcaacttcaacaaaattatccagctcgcccaactaggccggagattcacttggct
ccaaatcaacaatttagcaacacttttgcctttgcttctggtaagccaggttctaaacca
ggaggacagcagatttatgatcctttctcgcccacttctgtgcctacctcaaagtctgag
gggtaa
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