Castanea sativa (European chestnut): 142607834
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Entry
142607834 CDS
T11266
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142607834
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
142607834
NCBI-ProteinID:
XP_075635592
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Position
8:complement(35552698..35556954)
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AA seq
713 aa
AA seq
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MKEAEKSLDPQLWHACAGGMVQMPQVNSKVFYFPQGHAEHAQVHVDFSSLPRIPALIPCR
VGAVKFLADPETDEVFSKIRLVPLGNRNIGELDFEDDGVVGANGSENPEKPASFAKTLTQ
SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLT
TGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGALESPSGWNPGPGNSVSSY
GGFSMFLREQENKVMRNSGPAGGNLSGKGKVMPESVIEAAALAASGQPFEVVYYPRASTP
EFCVKASAVKATMRTQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPNSPWRL
LQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHISPFSPPRKKLRFPQHPDFSHDGQFPMP
SFSGNPLGSSSPLCFLSDNTPAGIQGARHAQFGISLSDLHFNNKLQPGLFPSNFQRYNMN
PRTSNSIMTSNTNSNENISCLLTIGNSSQNLEKSDNVKRHQFLLFGQPIITEQQISRSCS
SDTVSQVLTGKSSSDENQDKVKFLSDGSGSTLDQQVSPEKSSSTGFSWHQGFQTTELGLD
TGHCKVFMESEDVGRTLDLSVLGSYEELHRRLANMFGIERSDMLNHVVYRDATGAVKQTG
DEPFSDFMKTAKRLTIFNVSSSNNIGRTWITGMRNAENGLDASTKTGPLSIFA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggcagagaagagcttggatcctcagctatggcatgcctgcgctggaggcatg
gtacagatgcctcaggttaactccaaggtcttctatttccctcagggccacgcagagcac
gctcaggttcacgtagatttcagctctttacccagaattcctgctctcattccttgcaga
gttggggctgtgaagttcttagctgaccctgaaactgatgaggttttctcaaagatcaga
ttggttccacttggaaacagaaacattggtgagcttgattttgaggatgatggggttgtg
ggggctaatgggtctgaaaatccagagaaaccggcctcgtttgctaagacattgactcag
tctgatgcgaacaacggtgggggtttctcggttccgaggtactgcgctgagacgatcttt
ccacggttggattacacggcggatccgcctgttcaaactgtgattgccaaggatgttcat
ggcgaggtttggaaattcaggcatatttatagaggtacaccacggcggcatttgttgaca
actgggtggagcacatttgtgaaccagaagaagctggttgcaggggattcaattgtgttc
ctcagagctgaaaatggcgatctttgtgttggtattcgacgtgccaagcgtggaattggt
ggtgcacttgaatctccatctggatggaaccctggtccaggaaattctgtttcatcttac
ggtggattttccatgtttttgagggagcaggagaacaaagtaatgagaaattcaggccca
gctggtggcaatttgagtggaaagggaaaggtgatgcctgaatcagttattgaagctgcg
gctcttgctgctagtgggcagccatttgaggttgtttattatccgagggccagcacgccg
gagttttgtgtcaaggcctcagctgtgaaggcgactatgaggacgcaatggtgctccggg
atgaggtttaagatggcatttgaaactgaggattcttccaggataagctggttcatggga
accattgcatctgttcaggttgctgaccctcttcgttggcctaattccccatggcggctt
cttcaggtgacttgggatgagccagatttgctacaaaatgtgaagcgcgtaagcccatgg
ttggttgagttggtatcaaatatgcctgttattcacatctcgcccttctcaccaccaaga
aagaagttacggtttccacaacacccagacttttcacatgacggccaatttccaatgccg
tcattttcaggcaacccccttgggtccagcagccccttgtgttttctatctgataacact
cctgcaggcatacagggagccaggcatgctcaatttggtatatctttatcagatctccac
tttaacaacaaactgcagccagggctgtttccatccaattttcagcgatacaatatgaat
cctagaacttccaatagcattatgacgagcaatacaaacagcaatgaaaatatatcttgc
ttgctaacaataggaaattctagtcagaatttggagaaatctgataacgtgaagagacac
cagtttttactctttggtcaaccaataatcaccgagcagcagatatctagaagctgttct
agtgacacagtctcacaagttcttacagggaaaagttcatcagatgagaatcaagacaaa
gtaaagtttctttctgatggatcaggatccactcttgatcagcaagtttcaccagaaaag
tcatcaagtactggattttcatggcaccagggtttccaaaccactgaacttggcctggat
acgggtcactgcaaggtatttatggagtcagaggatgtgggacgcacacttgacctttcg
gttcttggctcttatgaagagctgcacaggaggctggccaacatgtttggaatagaaaga
tcagacatgctgaaccatgtcgtctaccgggatgcaacaggtgctgtcaagcaaactgga
gatgaaccattcagtgattttatgaaaacagcaaaaagactcactatctttaatgtttcg
agcagcaacaatattggaaggacatggattacagggatgaggaatgctgaaaatggacta
gatgcatctaccaagacaggtcccttgagcatatttgcctaa
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