Castanea sativa (European chestnut): 142607852
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Entry
142607852 CDS
T11266
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142607852
04121 Ubiquitin system [BR:
csaa04121
]
142607852
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142607852
Membrane trafficking [BR:
csaa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
142607852
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142607852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Rad50_zn_hook
zf_RING_Vps8
DUF1272
DUF7573
Motif
Other DBs
NCBI-GeneID:
142607852
NCBI-ProteinID:
XP_075635616
LinkDB
All DBs
Position
8:complement(28097459..28099364)
Genome browser
AA seq
388 aa
AA seq
DB search
MSSSPTTSYWCYRCSRFVRMWVQDNNITCPNCHGGFVEEVDTVPSPPPQSESLHRRFPPS
TMYLFGSTAQDPNPTRRSRRNPGNRSPFNPVIVLRGGVASTSDSEPVAADADAIGVERID
NANGFDRLLDQLTQIEVTGFGRPENPPASKAAIESLPTIEIVETHVSAESHCAVCKEQFE
LGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSERERSRNESQAEISVEAEETVG
LTIWRLPGGGFAVGRFAGGGRRAGDRESPVVYTEMDGGFGGSGSGAPRRVSRVRRSSGSN
GRIGGGESGGFRRVFRNLLSFLRLRRSSSSSSSSSNFNYSYSSSSSQSGSESGSLRTNQD
HSGSVFSRYVRRRSRAWAVEDQSENGRY
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtctccgacgacgtcgtattggtgttacagatgctctcgctttgtccgcatg
tgggttcaagacaacaacataacctgtccaaactgtcacggcggattcgtcgaagaagtc
gacaccgttccttcccctcctcctcaatcggaaagtctccaccgtcggtttcctccctca
accatgtacttattcggatccaccgcacaagacccgaatccgacccgacgatctcgtcgt
aatccgggtaaccgctcacccttcaaccctgtcatcgtcctgcgtggcggagttgcttcc
acttccgattcagaacccgtcgccgccgacgccgacgcaatcggagtagagagaatcgac
aacgctaacggttttgacaggttactagaccagttgacccagatcgaagtaaccgggttc
gggcgacccgagaacccgccggcgtcgaaagcagcgatagagtctctccccaccatcgaa
atcgtcgagacccacgtctcggccgagtcgcactgcgcggtctgcaaggaacagttcgaa
ctcggatccgaggctcgcgaaatgccttgcaagcacatataccattccgattgtatcctc
ccatggctctctctccgaaactcttgcccggtatgccggcacgagttgcccagcgagcga
gagcgaagccgaaacgagagccaggccgagatttcggtcgaggcggaggagacggtggga
ttgacgatttggaggttaccgggaggtgggtttgctgtggggaggttcgccggaggagga
agaagagctggagatagagaatcaccggttgtgtacacggaaatggatggcgggtttggc
gggtcgggttccggggctccaagaagggtttcgagagtcagacggagtagcggtagtaat
ggtagaattggtggaggagagagtggtgggtttcggagggtttttcgtaatttgctctcg
ttcttgaggttaagaaggtctagttctagttctagttctagttcgaatttcaattattct
tattcttcatcgtcttcgcaatctgggtctgaatctgggtctttgagaacaaatcaggat
cattctggttcagtgtttagtaggtacgtgcgaaggcggagcagagcttgggctgtggag
gatcaaagtgaaaatgggaggtattga
DBGET
integrated database retrieval system
