Castanea sativa (European chestnut): 142607895
Help
Entry
142607895 CDS
T11266
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142607895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142607895
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142607895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
DUF5708
Motif
Other DBs
NCBI-GeneID:
142607895
NCBI-ProteinID:
XP_075635668
LinkDB
All DBs
Position
8:complement(35898139..35903520)
Genome browser
AA seq
683 aa
AA seq
DB search
MGHSNSRLKRVQVLDDLEVADLPEASENHVIVNFKKATAFSEKRTSFKDKVLRRVFSEDY
EKETKRRILDPRGKIVSNWNKIFSLSCLFALFLDPLFLLLPVIDSQGCLANGMTAQVVLT
ILRSVTDVFYLIQIIVRFHTAYVAPSSRVVGRGELVIDPSKIAMRYLRKGFIIDLMASLP
LTQVLLWVIIPNVEGTVVTLRKNGMWFIMIVQYIPRVILTYPLSSKIIDEGGIVADTAWT
GAGYNLMLYLMASHLSGSWWYLLGIERQEACWRSACTLESACRNEYFDCHTVNDDARSNW
FSSTNVTNQCTPTSNFYQYGIFGDLENSNVIASPFFNKYFYCLWWGLRNLSSTGQNLSTS
TYMGEVVFTIFVATLGLFLFALLIGNMQRYLQSATQRLEEWRIRRTDTEQWMHHRQLPSE
LKQSVRQYDQSKWLATKGVNEETLLDGLPMDLRREIKRHLCLSLVRRVPLFDQMDETLLD
AICERLRPALCTNNMFIVREGDPVNQMIFIIRGHLDSYTTDGGRFGFFNSSRLGSGDFCG
EELLTWALDPRPNVILPTSTRTVKAITEVEAFALVAEDLKFVASQFRRLHSKQLRHTFRH
YSHQWRTWAACFIQAAWRRHKKLKEMAKNGISESGRPLKETFWSKYAEALVEKTRSRRFV
LESAESVSSTINSLQKPIEVDFD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacagtaattcaagactcaaaagagttcaagttctagatgatcttgaagtagct
gacctccctgaagccagtgaaaatcatgtgatcgtgaacttcaagaaagccactgctttt
tctgagaagagaacaagttttaaagacaaagtcctgagaagagtattttctgaggactat
gagaaggagacgaaaagaaggatactggatcctcgaggaaaaatcgttagcaactggaac
aaaattttctcactctcatgcctatttgctttattcttggatccattgtttttattgttg
cctgtaatcgatagccaaggttgcctagctaatggaatgacggcccaagttgtcctcacc
atcctaagatcagtgactgatgtgttttatttgattcagatcattgttcggtttcacaca
gcgtatgtagcaccctcttctcgtgttgttggaagaggagagcttgtgatcgatccttca
aagattgcaatgaggtaccttagaaaaggtttcattatcgacctcatggcttccctgcca
cttactcaggtgttactttgggtaattatacccaatgttgagggtactgtagtgactctg
agaaaaaatggcatgtggtttatcatgatagtccaatatatcccaagggtgattctcacc
tatcctctctcatcgaaaattattgatgaaggtggcattgtggcagacacagcatggacc
ggagctggttataacctcatgctttacctaatggctagccatctttcaggatcttggtgg
taccttctaggtattgagcgacaagaagcatgctggagaagtgcgtgcacccttgaatcg
gcttgccgaaatgaatactttgattgtcataccgttaatgacgatgctaggtccaattgg
ttcagctcgacaaatgttaccaatcaatgcactccaacttctaacttttaccaatatggt
atatttggagatttagagaactcaaacgttatagcttcaccattcttcaacaagtacttt
tactgtttatggtggggcttaaggaacctaagttctacgggacaaaatcttagtacaagc
acttatatgggagaagttgttttcaccatcttcgttgccacccttgggctgtttctgttt
gcactgctcattggaaatatgcaaagataccttcaatcagcaacacagcgattagaagag
tggaggatcaggaggactgatacagaacaatggatgcatcataggcagctaccttcagaa
ctaaagcagtctgttcgacaatatgatcaatcgaagtggttggctactaaaggtgtcaat
gaagaaacacttctcgatggcctccctatggatctccggagagagatcaagcgccatctt
tgcctctctctagtccgacgagtcccattgtttgatcaaatggatgaaacactgctagac
gcaatatgtgagaggcttagacctgcattatgcaccaacaatatgttcattgtgcgcgag
ggtgaccctgtcaatcaaatgatattcataattcgaggtcaccttgactcttacaccact
gatggtgggcgttttgggttcttcaactcatcaagacttggctcaggtgacttctgtggt
gaggagctactgacatgggctttggatccacgcccaaatgtcatactcccaacttccaca
cgcacagtgaaggctataactgaagtggaggcgtttgctctagtagcagaggacttaaaa
tttgttgcatcacaattccgaaggctacatagtaaacaacttagacacacgtttaggcac
tactcacaccaatggcgaacatgggctgcatgttttatacaagcagcatggcgtaggcat
aaaaagctgaaggaaatggctaaaaatggaatcagtgagagtggacggcctctaaaggaa
accttctggtcaaagtatgcagaagcattagttgagaagactagaagtagaaggtttgtc
cttgaatctgcagaatcagtttccagcactatcaactcgctgcaaaagcccatagaggta
gattttgattga
DBGET
integrated database retrieval system