KEGG   Castanea sativa (European chestnut): 142608171
Entry
142608171         CDS       T11266                                 
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
csaa  Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csaa03016]
    142608171
Transfer RNA biogenesis [BR:csaa03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    142608171
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_HPS5 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_LRRK2 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR11_1st WD40_RFWD3 Beta-prop_ELP1_2nd Beta-prop_WDR75_2nd WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 142608171
NCBI-ProteinID: XP_075636000
LinkDB
Position
8:46905446..46913983
AA seq 846 aa
MTMSINGGTEVKKVFIGAGCNRVVNNVSWGACDLVAFGAQNAVVIFSPKTAQIVTTLPGH
KSSVNCTQWLPSNKFAFKAKELEKHYLLSGDADGAIILWEFSLLERKWRYALQAPQSHKK
GVTCITGIMVTKTEALVASTSSDGKVHVWEVLFPSTTGGDCQLQCLETLFVGSKPMVALS
LAELPGNTGHMVLAMGGLDNKIHLYCGERTGKFLRACELKGHTDWIRSLDFSLPICTNGE
PNSILLVSSSQDKGIRIWKMALRSSLCSTQGAYRKEEMSLASYIEGPLLVAGSSSYQISL
ESLLIGHEDWVYSVEWQPPSTESVEGIGYYQPQSILSASMDKTMMIWQPEKNSGIWMNVV
TVGELSHCALGFYGGHWSPSGDSILAHGYGGSFHLWKNVGVDLDNWQPQKVPSGHFAGVT
DIVWARSGEYVLSVSHDQTTRIYASWQNEASLIDGDSWHEIARPQVHGHDINCVTIVQGK
GNHRFVSGADEKVARVFEATLSFLKTLNHATSQNISLPEDLQADVQVLGANMSALGLSQK
PIYVQATHDNHDRNGNDGLDTIETIPDAVPAVLTEPPIEDQLAWHTLWPESHKLYGHGNE
LFSLCCDHEGKLVASSCKAQSATAAEIWLWQVDSWKAVGQLQSHSLTVTQMEFSHDDSML
LAVSRDRQFSVFTIKRTGTDEISYQLLARQEAHKRIIWSCSWNPYGHEFATGSRDKTVKI
WAVDKGSSVKLLMTLPQFDSSVTALSWVGLGHQKNDGFLAVGMESGLIELWSLSVRRADD
GSGSAAGVAAAVAVKLDPFMCHVSAVNRLAWKGPKKSENCKNVQLASCGADNCVRVFEVN
VDYAEN
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgaccatgtcaataaatggaggaacggaggtgaagaaagtgtttataggagcggggtgc
aacagagttgtgaacaatgtttcatggggagcttgtgatttggtagcctttggtgcccaa
aacgccgttgttatattctctcccaagactgcacagattgtgacaactctaccgggccac
aaatcctctgtgaattgcacccaatggcttccaagtaacaaatttgcatttaaagctaaa
gagttagagaagcactaccttctctctggagatgctgatggtgccattattctgtgggaa
ttttctcttcttgagagaaagtggaggtatgcgttacaagcaccacaatcacacaagaag
ggtgtcacatgcattactggaattatggttactaaaaccgaggcacttgttgcctcaact
tcttcagatggtaaagtccatgtatgggaagtgttgttcccatctactaccggaggtgat
tgtcaattgcaatgtctggaaactctctttgttggttcgaaacctatggtggcactttca
ttagcggaattgcctggaaatactggtcatatggttctagcaatgggaggattggataac
aagattcatctttactgtggagagaggacaggaaagtttcttcgtgcttgtgaattaaaa
gggcatacagactggatccgaagtctggacttctcattacctatatgcaccaatggtgaa
ccaaatagtattctacttgtaagttcgtctcaggacaaaggcatacgcatatggaagatg
gctctaaggagttctctttgcagcactcagggtgcatacaggaaagaagaaatgagtctt
gcatcttatattgaaggccctttgcttgtagctggttcatcctcttatcaaatatctttg
gaatctcttctaattggacatgaagattgggtatattcagtcgagtggcaacccccttca
actgaatctgtagaaggtattggttactatcagcctcaaagcatcttatctgcatctatg
gacaagacaatgatgatctggcaacctgaaaagaattctggaatctggatgaatgttgtc
actgttggagaattaagtcattgtgctttggggttttatggtggccattggagcccaagt
ggggattcaattttagcacatggatatggtggatccttccatctctggaaaaatgttggt
gtggacctggataattggcaaccacaaaaagttccctctgggcactttgcaggagtgaca
gatattgtgtgggcaagatctggtgaatacgtactgtcagttagtcatgaccagacaact
cgaatatatgcttcatggcaaaatgaagcttctcttatagatggggactcttggcatgaa
attgcacgtcctcaggttcatggtcatgatattaattgtgtgaccatcgtccaaggaaag
gggaaccatcgttttgtcagtggagctgatgagaaagttgccagagtttttgaagctact
ttgtcttttttgaagacattgaaccatgccacttcacagaatattagtttacctgaagat
ctccaagcagatgttcaggtcttgggcgcaaatatgtctgctcttgggctatcacagaaa
cccatctatgttcaggccacacatgataaccatgacagaaatgggaatgatggccttgac
accattgaaactattcctgatgctgttccagctgtgttgactgaacctccaattgaagat
caactggcatggcatacactgtggccagaatcacacaaactttatggtcatgggaatgaa
ttgttttctttatgctgtgaccatgaagggaagcttgttgcttcatcatgcaaggcccaa
tcagcaacagcagcagaaatatggctatggcaagtggattcatggaaggcagttggtcag
ttgcagtctcacagcttaactgtgacacagatggagttctctcatgatgacagcatgctt
ttggctgtctcaagggatcgccaattctccgttttcacaatcaaaagaacaggcactgat
gaaatcagttatcagctcctagcaaggcaggaggcacacaaaagaattatttggtcatgc
tcttggaatccctatggtcatgaatttgcaacgggttcacgggacaagacagtgaagatc
tgggctgtcgataagggatcttctgttaagctgcttatgactttgccacaattcgatagt
agtgtcacagcattatcttgggttggtcttggtcaccagaaaaatgatggtttcctagca
gttggaatggaaagcggactcattgaactttggagtctgtctgtcagaagagctgatgat
ggcagtggctcagcagcaggtgtagctgctgctgttgcagtaaaacttgatcccttcatg
tgccatgtctctgcagtaaaccgattagcatggaaaggccccaagaagagtgaaaattgc
aagaatgtacagcttgcttcatgtggtgctgataattgtgttagagtgtttgaggtaaat
gttgattacgcggaaaattaa

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