Castanea sativa (European chestnut): 142608171
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Entry
142608171 CDS
T11266
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142608171
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
142608171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_HPS5
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_LRRK2
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR11_1st
WD40_RFWD3
Beta-prop_ELP1_2nd
Beta-prop_WDR75_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
142608171
NCBI-ProteinID:
XP_075636000
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All DBs
Position
8:46905446..46913983
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AA seq
846 aa
AA seq
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MTMSINGGTEVKKVFIGAGCNRVVNNVSWGACDLVAFGAQNAVVIFSPKTAQIVTTLPGH
KSSVNCTQWLPSNKFAFKAKELEKHYLLSGDADGAIILWEFSLLERKWRYALQAPQSHKK
GVTCITGIMVTKTEALVASTSSDGKVHVWEVLFPSTTGGDCQLQCLETLFVGSKPMVALS
LAELPGNTGHMVLAMGGLDNKIHLYCGERTGKFLRACELKGHTDWIRSLDFSLPICTNGE
PNSILLVSSSQDKGIRIWKMALRSSLCSTQGAYRKEEMSLASYIEGPLLVAGSSSYQISL
ESLLIGHEDWVYSVEWQPPSTESVEGIGYYQPQSILSASMDKTMMIWQPEKNSGIWMNVV
TVGELSHCALGFYGGHWSPSGDSILAHGYGGSFHLWKNVGVDLDNWQPQKVPSGHFAGVT
DIVWARSGEYVLSVSHDQTTRIYASWQNEASLIDGDSWHEIARPQVHGHDINCVTIVQGK
GNHRFVSGADEKVARVFEATLSFLKTLNHATSQNISLPEDLQADVQVLGANMSALGLSQK
PIYVQATHDNHDRNGNDGLDTIETIPDAVPAVLTEPPIEDQLAWHTLWPESHKLYGHGNE
LFSLCCDHEGKLVASSCKAQSATAAEIWLWQVDSWKAVGQLQSHSLTVTQMEFSHDDSML
LAVSRDRQFSVFTIKRTGTDEISYQLLARQEAHKRIIWSCSWNPYGHEFATGSRDKTVKI
WAVDKGSSVKLLMTLPQFDSSVTALSWVGLGHQKNDGFLAVGMESGLIELWSLSVRRADD
GSGSAAGVAAAVAVKLDPFMCHVSAVNRLAWKGPKKSENCKNVQLASCGADNCVRVFEVN
VDYAEN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtcaataaatggaggaacggaggtgaagaaagtgtttataggagcggggtgc
aacagagttgtgaacaatgtttcatggggagcttgtgatttggtagcctttggtgcccaa
aacgccgttgttatattctctcccaagactgcacagattgtgacaactctaccgggccac
aaatcctctgtgaattgcacccaatggcttccaagtaacaaatttgcatttaaagctaaa
gagttagagaagcactaccttctctctggagatgctgatggtgccattattctgtgggaa
ttttctcttcttgagagaaagtggaggtatgcgttacaagcaccacaatcacacaagaag
ggtgtcacatgcattactggaattatggttactaaaaccgaggcacttgttgcctcaact
tcttcagatggtaaagtccatgtatgggaagtgttgttcccatctactaccggaggtgat
tgtcaattgcaatgtctggaaactctctttgttggttcgaaacctatggtggcactttca
ttagcggaattgcctggaaatactggtcatatggttctagcaatgggaggattggataac
aagattcatctttactgtggagagaggacaggaaagtttcttcgtgcttgtgaattaaaa
gggcatacagactggatccgaagtctggacttctcattacctatatgcaccaatggtgaa
ccaaatagtattctacttgtaagttcgtctcaggacaaaggcatacgcatatggaagatg
gctctaaggagttctctttgcagcactcagggtgcatacaggaaagaagaaatgagtctt
gcatcttatattgaaggccctttgcttgtagctggttcatcctcttatcaaatatctttg
gaatctcttctaattggacatgaagattgggtatattcagtcgagtggcaacccccttca
actgaatctgtagaaggtattggttactatcagcctcaaagcatcttatctgcatctatg
gacaagacaatgatgatctggcaacctgaaaagaattctggaatctggatgaatgttgtc
actgttggagaattaagtcattgtgctttggggttttatggtggccattggagcccaagt
ggggattcaattttagcacatggatatggtggatccttccatctctggaaaaatgttggt
gtggacctggataattggcaaccacaaaaagttccctctgggcactttgcaggagtgaca
gatattgtgtgggcaagatctggtgaatacgtactgtcagttagtcatgaccagacaact
cgaatatatgcttcatggcaaaatgaagcttctcttatagatggggactcttggcatgaa
attgcacgtcctcaggttcatggtcatgatattaattgtgtgaccatcgtccaaggaaag
gggaaccatcgttttgtcagtggagctgatgagaaagttgccagagtttttgaagctact
ttgtcttttttgaagacattgaaccatgccacttcacagaatattagtttacctgaagat
ctccaagcagatgttcaggtcttgggcgcaaatatgtctgctcttgggctatcacagaaa
cccatctatgttcaggccacacatgataaccatgacagaaatgggaatgatggccttgac
accattgaaactattcctgatgctgttccagctgtgttgactgaacctccaattgaagat
caactggcatggcatacactgtggccagaatcacacaaactttatggtcatgggaatgaa
ttgttttctttatgctgtgaccatgaagggaagcttgttgcttcatcatgcaaggcccaa
tcagcaacagcagcagaaatatggctatggcaagtggattcatggaaggcagttggtcag
ttgcagtctcacagcttaactgtgacacagatggagttctctcatgatgacagcatgctt
ttggctgtctcaagggatcgccaattctccgttttcacaatcaaaagaacaggcactgat
gaaatcagttatcagctcctagcaaggcaggaggcacacaaaagaattatttggtcatgc
tcttggaatccctatggtcatgaatttgcaacgggttcacgggacaagacagtgaagatc
tgggctgtcgataagggatcttctgttaagctgcttatgactttgccacaattcgatagt
agtgtcacagcattatcttgggttggtcttggtcaccagaaaaatgatggtttcctagca
gttggaatggaaagcggactcattgaactttggagtctgtctgtcagaagagctgatgat
ggcagtggctcagcagcaggtgtagctgctgctgttgcagtaaaacttgatcccttcatg
tgccatgtctctgcagtaaaccgattagcatggaaaggccccaagaagagtgaaaattgc
aagaatgtacagcttgcttcatgtggtgctgataattgtgttagagtgtttgaggtaaat
gttgattacgcggaaaattaa
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