Castanea sativa (European chestnut): 142608256
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Entry
142608256 CDS
T11266
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142608256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142608256
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
142608256
Prokaryotic type
Archaeal type
TFB
142608256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
Zn_ribbon_LysW
RB_B
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
142608256
NCBI-ProteinID:
XP_075636112
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All DBs
Position
8:52642309..52648987
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AA seq
318 aa
AA seq
DB search
MASSSEWLCPECKRATEVVLDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPV
RVGGPSNPLLSDGGLSTVISSRPNNANGGSDFLGSGLGRWQSRGSNPDRSLLQAFKAIAS
MSDRLGLVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTVKEICSV
ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAV
QKSEELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLSTGVAEGTIRNSYKDLYPYAVR
LIPSWYAKEEDLGNLCSP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcgtcagagtggttatgtccagagtgcaagcgagcaacggaggtggtgcta
gaccactccgcaggcgacaccgtgtgttccgagtgtggcctcgttctcgaggctcactcc
atcgacgagacctcagagtggcgcaccttcgccaacgagtccggtgacaacgacccagtt
cgcgtcggtgggccctccaaccctctgctttccgatggcggcctctccaccgtgatatct
tcaagacccaataatgcgaacggtgggagtgacttcttgggttcgggtttgggccgctgg
cagagccgtgggtctaacccggatcgctcgcttcttcaggcttttaaagccattgcctcc
atgtctgataggttgggccttgttgcaacaataaaggatcgagccaatgaaatatataag
aaagtagaagatcaaaaacctcttcgaggacgaaatcaggatgcaattttggctgcttgc
ctctacattgcttgtcgtcaagaagacaagccccgcactgtgaaagaaatctgttctgtt
gctaatggagccacaaagaaggaaattggtcgtgcaaaagagtttattgtaaaacaactg
gaagtagagatgggtcagtctatggaaatgggaaccatacatgctggggattttttgaga
cgtttttgttcccaccttggcatgactaatcaagcagtaaaggctgctcaagaagctgta
cagaaatctgaagagcttgatataaggaggagcccaatatcagtagcagcagctgtaatt
tatatgataactcagctatcagatgacaagaagcttctcaaagacatatctctttccact
ggagtggctgaagggaccatcaggaattcctacaaggatctttatccctatgctgtaagg
ctaataccaagttggtatgcgaaggaggaagatctcgggaacctctgcagcccataa
DBGET
integrated database retrieval system
