Castanea sativa (European chestnut): 142608271
Help
Entry
142608271 CDS
T11266
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142608271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142608271
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142608271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
142608271
NCBI-ProteinID:
XP_075636131
LinkDB
All DBs
Position
8:complement(35960705..35965394)
Genome browser
AA seq
697 aa
AA seq
DB search
MGHRNSRLKRTQVLDDAEVADSVNDVIENYYYIDGTKCKTTPKSKPKKANDFSEKTRSFK
DKVLRRVFSEDYEKEKKRILDPSGKTISNWNKIFSIACLISLFVDPMFLLSPIMRDQVCL
TNATSLQVVLTIVRSVLDVFYVIQIFVRFHTAYVAPSSRIFGRGELVIDPSKIAMRYLRR
GFWMDLLVSLPLPQVLAWVVIPNVEGTEVTIRKKAMWFIMLIQYLPRVLHIYPFSSQIVN
TTGLLSETVWTGAVYNLVLYLVASNVSGAWWYILAIERQEACWRSVCSLESPTCQNVYFD
CRSVNDVSRANWFNSTNVTNLCNTNASPIYYQYGIFGDAVTTDVVAAQFFTKYFYCFWWG
LRQLSSIGNNMFTSTSMGEDVFALVVATLGLFLLTLLIGNMQRFLQSATLRLEEWRIMRT
DTEQWMKYRQMPPELKQSIRQYDQYKWLATRGVDEEKILNSLPMDLRIKIKRHLCLSLVR
GVPLFNQMDETMLDAICERLKPALCTKNMFLVREGDPVKQMLFIIRGHLYSYTTDGDRSG
SSNSYRIGSGDFCGEELLTWALDPRPNVIFPSSTHMVKAITEVEAFALGAEDLKFVASQF
RRVHGKQLKHIFRVYSHQWRTWAAFFIQATWRRHKKLKEMAEIGARELGRAPRDFFWMRY
AETLLESSRSRGVVNNSAETSSSDVNLLQKPAEPNFD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacagaaattcaagactcaaaagaactcaagttctagatgatgctgaagtagct
gacagtgtaaatgatgtgatagagaactactactatattgatgggactaagtgtaagact
acacctaaatcaaaacccaagaaggccaatgatttttctgagaagacaaggagttttaaa
gataaagtcttgcgtagagtattttctgaggactatgagaaggagaagaagaggatactg
gatcctagtggaaaaaccattagcaactggaacaagattttctcaatcgcttgtctaatt
tctttattcgtggatccaatgtttttattgtcacctataatgagagaccaagtctgctta
actaatgcaacgagtctccaagttgtcctcaccatcgtaaggtctgtgcttgatgtgttt
tatgtgattcagatctttgttcggtttcatacagcttatgtagcaccttcttcacgtata
tttggaagaggagagctagtcatagacccttcaaagattgcaatgaggtaccttcgaaga
ggtttctggatggacctcttggtttccctgccacttcctcaggtgttagcttgggtagtc
atacccaatgttgagggtactgaagtgacaataagaaaaaaagccatgtggttcatcatg
ttaattcagtatctccctagggtgcttcacatctatcctttctcgtcgcaaattgttaat
acaactggtcttttgtcagaaacagtatggacaggagctgtttataaccttgtgctttac
ctagtggcaagcaatgtttcaggagcttggtggtacattctagcaattgagcgccaagaa
gcatgttggagaagtgtgtgcagccttgagtcaccgacttgtcaaaatgtatactttgat
tgccgtagtgttaatgatgtttctagggccaattggttcaactcgacaaatgtcacaaat
ctatgcaatacaaatgcaagtcctatctattatcagtatggtatatttggagatgcagtg
accacagatgttgtagccgcccaattcttcaccaagtacttctactgtttctggtggggt
ttaaggcagctaagttctataggaaataatatgtttacaagtacttccatgggagaagat
gtttttgccctcgttgttgccacccttgggctgtttctattaacactgctcattggaaat
atgcaaagattccttcaatcagcaacactgcgattggaagagtggaggatcatgagaact
gatacagaacaatggatgaaatatagacagatgcctccagaactaaagcagagtattcga
caatatgatcaatacaagtggttggctactagaggggtcgatgaagaaaaaattctcaat
agcctccctatggatctccggataaagatcaagcgccatctctgcctctctttagttcga
ggagttccgctgtttaatcaaatggatgaaacaatgttggatgcaatatgtgagaggctt
aagcctgcattatgcaccaaaaatatgttccttgtgcgtgaaggtgaccctgtcaagcag
atgctttttataattcgaggtcacctttactcttacaccacagatggtgaccgctctggg
tcttccaactcatacaggattggctcaggcgacttctgcggtgaggagctactgacatgg
gccttggacccgcgtccaaatgtcatctttccatcatccacacacatggtgaaagctata
actgaagttgaggcgtttgctctaggagcagaggacttaaaatttgtggcatcacaattc
cgaagggtgcatggaaaacaacttaaacacatttttagggtctactctcaccagtggcga
acatgggcagcctttttcatacaggcaacgtggcgtaggcataaaaagttgaaggaaatg
gctgaaattggagctagggagctaggacgagccccaagggatttcttttggatgaggtat
gcagaaacactactggagagcagtagaagtaggggggttgtcaacaactctgctgaaaca
agttccagtgatgtcaacttgctacaaaagcctgcagagccaaattttgattga
DBGET
integrated database retrieval system
