KEGG   Castanea sativa (European chestnut): 142608329
Entry
142608329         CDS       T11266                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03030  DNA replication
csaa03410  Base excision repair
csaa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    142608329
   03410 Base excision repair
    142608329
   03420 Nucleotide excision repair
    142608329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csaa03032]
    142608329
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142608329
Enzymes [BR:csaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     142608329
DNA replication proteins [BR:csaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    142608329
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      142608329
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 142608329
NCBI-ProteinID: XP_075636199
LinkDB
Position
8:44626945..44659115
AA seq 2206 aa
MNGEGRRRDRRDPRSSKKQKLIRTAEEELESKFGFDLFSEGDKRLGWLLTSSPSSWEDED
TQHVYSCVDLYFVSQDGSTFKSKYKFRPYFYAATKEKTEVDVDAYLRRRYESQIADIEII
EKEDLDLKNHLSGLHKPYLKLSFDTVQQLMNVKSDLMHVVQRNQEKFDAAEAYESIIAGK
KEQRPQDFLDCIVDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSTGLMLEKRTDLLQRAE
VHVCAFDIETTKLPLKFPDAEYDLVMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEF
EGYFKVSNVRNEVELLRQWFAHMREVKPGIYVTYNGDFFDWPFLESRAAYHGLKMSEEVG
FQCDKNQGECRSKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVSF
AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QAYQANVICPNKHQSDPEKFYNSHLLESETYIGGHVECLESGVFRSDIPTSFKLDPSAYE
QLINNLDRDLQYAIRVEGKMDLESVSNYDEVKNAIMEKLVRLQGEPIRDECPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYHLKK
QIESEFVDGTGGQLPKSFLDLPKTEQQLRLKERLKKYCQKAYKRVLDKPVTELREAGICM
RENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARVLVEKIGKPLELDTDGIWCVL
PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLTDPINKRYTTHSECSI
EFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQ
KSCAVTTARRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKHY
VRRWCKISSDVGIRSIIDWSYYKQRLSSAIQKVITIPAAMQKVANPVPRVVHPDWLHKKV
REKEDKFRQRKLVDIFSSLNRDEFLKKNSDAAGTNGVMNEEIVKDLEDFGNKSRNSVNGP
RPIVRCFEVNNRQNSVKTNDQVGSLQQQTDHRLPALSSENIDKNVDYRGWLELKKRKWKD
TIESRKRQRLSNSRTPHRGKGVLEVLGDVTNRKDTQGRSGVSSYFKRHEVSLTRCHWQII
QLVLSSDGQFFAWVVLEGIMLKIPMTVPRVFYLNSKAPVTEEFLGRRVSKILPHGRRSFN
LYEVIIDEDQFRKYSKKFAALLADPEVEGIYETKVPLEFNAILQIGCVCKVDKTAKKRNI
QDAWSLSELHMKTTTECSYLEQSISFFYLYNSISEGRAIYIGYFPASRTISVVVVNPYQN
KDLLPSFLEKQFREACQALSVEPPPPRNGVIFKVDYVGYIKDAEKILQREINEYRHEHHG
PTIAVIECPNAQSMKSDIRALDDFPCVNIPSNARDSHYQVLGWQQVAAKIGMQRCAASSQ
WLNDRISLSRYAHVPVGNFELDWLVFTADLFFSRALRDQQQVLWISDDGVPDLGGINEED
TCFADEVHQPVLTYPGAYRKITVELKIHHLAVNALLKSNQVNEMEGGALLGYDQDMHPGA
PVQNEHVGFDEDTACAPAFRVLKQLIQRCLADAVTFGNVYADAILQHLYRWLCSPESKLH
DPALHRILHKVMQKVFALLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKT
LQKRDLFEWIELEPMNFWHSLLFMDQYNYGGIPAKADDIIPDESQVDIVSSWNIAEYLPK
KIQDHFVFIVSQFMYIPWSYAQKQAAIRASLQDGNLSTPSVTVAGAENFESHMTEYLKGQ
ISSYFTDKLLGIVRDTILHMKGMSKTENDQNISSGLPQFADKTHKGDAALEFIKHVCAVL
ALDQNVQHDVLVMRKNLLKFVRVREFAPEAEFHDPCPSFNLSNVICSYCNDCRELDLCRD
TALLAQEWRCSVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLAEQ
CACAGPFKCKEDLTEFQSKMQIFLKIAIHQKFQLLQECTSWILELR
NT seq 6621 nt   +upstreamnt  +downstreamnt
atgaacggcgaaggaaggaggcgggaccgccgtgacccgcggagctccaagaagcagaag
ctaatccgcaccgccgaggaggagctcgagtccaagttcggcttcgatctcttctccgaa
ggcgacaagcgcctcggatggttgctcacatcctctccctcgtcttgggaggatgaagac
actcaacacgtctatagttgtgttgatctttattttgtttcgcaggatggttcgactttc
aagtcaaaatacaagttccgaccttatttctatgcagccacgaaggaaaaaacagaagta
gatgttgatgcatatttgagacggcgctatgaaagccaaattgctgatattgaaatcatt
gagaaagaagaccttgatcttaaaaaccatttgtctggcttgcacaaaccttatttgaag
ctatcttttgacacggttcaacaattaatgaatgtgaagagtgacctaatgcatgttgtt
caaagaaaccaggaaaaatttgatgctgccgaagcatatgagtccattatagcagggaaa
aaagaacaaaggcctcaagattttctagattgtattgttgatctccgcgagtatgatgtt
ccttatcatgttcgatttgccattgataatgatgtacgatgtgggcaatggtatgatgtt
agtgtatccagtactggtcttatgctggaaaagaggacagatcttttgcaacgtgctgaa
gtgcatgtttgtgcatttgatattgagactacaaagcttcctttgaaatttcctgatgct
gaatacgatttagtaatgatgatctcgtacatggttgatggacaagggtacctgattatt
aacagagagtgtgttggagatgatatagaggacttagagtatactccaaaaccggaattt
gaagggtattttaaagtgtcaaatgtgagaaatgaggtagagcttcttagacagtggttt
gcccatatgcgagaggtgaagcctggtatttatgtcacgtacaatggtgatttttttgac
tggccattcctggaaagcagagcagcctatcatgggttaaaaatgagtgaagaggtagga
tttcagtgtgacaagaatcaaggggagtgtcgttctaaattttcttgccatctggattgc
tttgcttgggtcaaacgtgatagttatctccctcaaggaagccagggcctaaaggctgtc
actaaagcaaagttgggttatgatcccctggaggtgaatcctgaggatatggttagcttt
gcaaaggaaaagcctcagatgatggcctcctattctgtttctgatgctgttgcaacttac
tacttgtacatgacgtatgttcatcccttcattttctctctagctactattatacctatg
tcaccagatgaggttttacgcaaaggtagtgggaccctttgtgaaatgctgcttatggtt
caggcgtaccaggctaatgttatctgtcctaacaaacatcaatctgacccagagaagttt
tacaatagtcaccttcttgagagtgagacttatataggtggccatgtggaatgcctcgaa
agtggggtttttagatctgatattcctactagtttcaagcttgatccatctgcctatgag
caactgatcaacaaccttgaccgggatttgcaatatgctataagagtagagggtaagatg
gacttggaatcagtgtccaattatgatgaagtgaagaatgctataatggaaaagcttgta
agactgcaaggcgagcctatacgtgatgaatgcccccttatttatcatcttgatgtagct
gcaatgtatccaaatattattttaacaaacagactccagccaccatcaatagttacagat
gaggtctgcactgcgtgtgatttcaaccgcccaggaaaaacttgtctacgaaagcttgaa
tgggtttggcgtggagagacattcatggcaaagaaaagtgactattatcatttgaagaag
caaattgagtctgagttcgttgatggtactggtggtcagttgccaaaatcttttcttgac
ctaccaaagacagagcaacaattgaggctaaaagagcgtctaaaaaagtactgtcagaag
gcatataaacgggtacttgataagccagtgactgaactccgagaagcagggatctgcatg
cgggaaaacccattttatgttgacactgttcgtagctttcgggacagaaggtatgaatac
aaaggacttaacaaggtttggaaagggaagttgtcagaagccaaggctagtggaaattct
ataaaaatccaggaagcacaagatatggtagtgctttatgattcattacaacttgcccat
aagtgtatacttaattccttctatggttacgtcatgcgcaagggtgcaagatggtactca
atggaaatggctggagtagttacatatacaggagcaaaaataattcagaatgctcgcgta
ttggttgaaaaaattggaaaaccacttgaattagatacagatggtatctggtgtgtgctc
cctggatcttttccagagaactttactttcaaaaccaaagacttgaagaagaagctgaca
atctcatatccatgtgttatgctcaatgttgatgtggccagaaacaatacaaatgatcaa
taccagacactaacagatccaatcaataaaagatatacaactcatagtgaatgctcgatt
gaatttgaagtcgatggaccatacaaggcaatgattattcctgcatctaaggaagaagga
atcttaattaagaagcgatatgctgtttttaatgatgatggaacccttgctgagcttaaa
ggttttgagatcaagcgtagaggtgagctgaagctcatcaaagttttccaggctgagctc
tttgacaagttcctccatgggtccaccttagaggaatgctattcagctgtagcttctgtt
gcaaaccgctggctcgatcttcttgataatcaaggaaaggatatcgcagacagtgagctg
cttgactacatatcagagtcaagcaccatgagcaagtccttagctgactatggtgaacaa
aagtcatgtgcagtgaccactgcaagacgccttgctgattttcttggtgatgcaatggtt
aaagataaaggactccgctgccagtatatagttgcatgtgaacctaagggaacacctgta
agcgagcgtgctgttcctgttgcaatatttgaaactgatgctgaaataatgaagcattat
gtgcggagatggtgcaagatttcatcagatgtgggcattcgatccattattgactggtct
tattacaagcaaaggcttagttcagcaattcagaaagttattaccattcctgcagcaatg
caaaaggttgcaaatcctgtccctagggtagtacatcctgattggctgcataagaaggtt
cgcgagaaggaggacaagtttcgacaacgcaaattagttgatatcttcagctcgttgaac
agggatgaatttttgaaaaagaatagtgatgctgctggcaccaatggtgtgatgaatgaa
gaaattgttaaagacttggaggactttggaaacaaaagcagaaattctgtaaatggacct
agaccaattgttcgttgctttgaagttaataatagacaaaactctgtcaaaacaaatgac
caagtaggcagcctgcaacaacaaactgatcataggctacctgccctttcttctgaaaat
attgacaaaaatgtagattatcgaggatggcttgaactgaagaaaagaaagtggaaagat
actatagagagtaggaagaggcaaagattgagcaattcaaggaccccacaccgtggtaaa
ggtgttcttgaagtgctgggtgatgtgacaaatcgtaaagatactcagggcagatctggc
gtcagttcatattttaagaggcatgaagtatctctaacacgctgccactggcagatcata
cagctagttctgagttcagatggccaattttttgcttgggttgttttagaaggaatcatg
cttaagattcccatgaccgttcctagagtattttacctcaactcaaaagcacctgtaaca
gaagaatttctgggaaggcgcgtaagcaagattcttcctcatggaaggcgtagctttaac
ttgtatgaggttataatcgatgaagatcaatttagaaaatatagcaaaaaatttgcagcc
ctccttgcagaccctgaagttgaggggatatatgaaacaaaagtgccattggagtttaat
gctatcctccagattggttgtgtctgtaaagtggacaaaacagctaagaaaagaaatatc
caggatgcctggagtctgagtgaactacacatgaagacaacaactgaatgctcttatctg
gagcaatccatctcattcttttacttgtataacagcatctctgaaggacgagctatatat
attgggtattttcctgcatcaagaacaatatctgttgtggtggttaatccttaccaaaat
aaagatttgttaccatcttttcttgaaaagcaattccgtgaagcttgccaagctctatct
gtagaaccacctcctcctagaaatggtgtaattttcaaggtggactatgttggatatatc
aaggatgctgaaaagattttgcaaagagaaataaatgagtacagacatgaacatcatgga
cctacaattgctgttattgaatgcccaaacgctcaatcaatgaagtcagatatacgagct
ctagatgatttcccatgtgtgaacattccttccaatgctcgcgatagtcactatcaggtt
cttgggtggcagcaagtggctgcgaaaattggaatgcaacgttgtgctgcatcgtcccag
tggttgaatgatagaatctctctgtcaagatatgcccatgtaccagtggggaattttgaa
cttgattggctcgtatttacagcagatctcttcttttcaagagcactacgtgatcaacaa
caggtactttggatatctgacgatggtgttccagatctaggtggcattaatgaggaagat
acctgttttgctgatgaggtccatcaacctgttcttacataccctggtgcatatagaaaa
ataacagtggagctaaagattcatcacctggctgtaaatgctcttttgaaaagcaaccaa
gtgaatgaaatggaaggaggtgctttgttaggatatgaccaggacatgcatcctggagca
cctgttcagaatgaacatgttggctttgatgaggatactgcatgtgcacctgcatttcgt
gtcctaaaacagttgatccaaaggtgccttgcagatgcagtcacgtttggaaatgtatat
gctgatgcaattttgcaacatctatatcgatggctctgcagccctgaatcaaaacttcat
gacccagctcttcaccgcatacttcacaaggtgatgcaaaaggtgtttgcattattgttg
gccgagtttcggaaattgggtgccacaattatttttgcaaacttctcaaaggttattata
gacacgggcaaatttgatctctctgctgccaaagcttactgtgatagcttgcttaaaact
ctgcaaaagagagacttgtttgagtggattgagcttgagccaatgaacttctggcattct
ttgcttttcatggatcagtataactatggtggaattccggccaaagctgatgatatcata
cctgatgaatctcaagtggatattgtgtcaagctggaatattgctgaatacttacccaag
aaaattcaggatcattttgtttttattgtctctcagtttatgtatatcccctggagttat
gcacaaaagcaggctgcaattagagcctctttgcaggatggcaacttgtctactccgtca
gtgactgttgcaggtgctgaaaactttgagtcacatatgacggaatatctaaaagggcag
atcagctcttacttcacagacaaacttttgggtattgttcgtgataccattcttcatatg
aaggggatgagcaaaactgaaaatgaccaaaacatatcttctgggctcccacaatttgct
gataaaacccacaaaggggatgctgcgcttgagttcattaagcatgtctgcgctgttctt
gccctagaccaaaatgttcaacatgatgttctggtgatgagaaagaatcttctaaaattt
gtgcgtgtgagggagtttgctccagaagctgagtttcatgatccttgcccatccttcaat
ttatcaaatgtcatttgcagctactgcaatgactgcagagaactggacttatgccgtgac
acagctctactggctcaggagtggcgctgttctgtgccacaatgtggccaaccttatgat
cgtgaggtcatggagaacgctcttcttcaaattgtacggcagagagaacgtctctaccac
ttgcaggacctggtgtgtcttaggtgcaatcaggtgaaggctgcacatttagctgagcaa
tgtgcctgtgcaggcccatttaagtgcaaggaagatttgactgaattccagagtaagatg
cagatttttttgaagatagctattcatcagaaatttcaacttctccaggagtgtacctca
tggattttagaacttcgataa

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