Castanea sativa (European chestnut): 142608415
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Entry
142608415 CDS
T11266
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142608415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142608415
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142608415
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142608415
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142608415
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142608415
Messenger RNA biogenesis [BR:
csaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142608415
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP60 / Chaperonin
142608415
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142608415
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142608415
Exosomal proteins of other body fluids (saliva and urine)
142608415
Exosomal proteins of breast cancer cells
142608415
Exosomal proteins of colorectal cancer cells
142608415
Exosomal proteins of bladder cancer cells
142608415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Transposase_24
Motif
Other DBs
NCBI-GeneID:
142608415
NCBI-ProteinID:
XP_075636303
LinkDB
All DBs
Position
8:complement(47044197..47049872)
Genome browser
AA seq
607 aa
AA seq
DB search
MASTFTAMSSVGSLATPGCRVMDKKFASSDKLSSSASISSFSFARRQNVMSQRNRSPKIC
AMAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGSNPVLITR
GIEKTTKALVSELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE
GKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEFENCKLLLVDKKITNARDLINVLED
AIRGGYPIIIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
VIRDEVGLTLDKADKEVLGTASKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQD
YEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLASKVDAIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKY
GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPMPAGNPM
DNSGYGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaactttcacagccatgtcttcagttggctccttggctactccaggctgccgt
gttatggacaagaaatttgcttcttcagacaagttgtcatcttctgcttccatttcttca
ttctcatttgctaggaggcagaatgtgatgtcacaaagaaatcgctctcccaagatttgt
gccatggcaaaggaattgcatttcaacaaggatggttcagctattaagaagctgcaaact
ggtgtgaacaagcttgcggatttagttggggttactcttggtccaaaaggcaggaatgtt
gttctggaaagcaagtatggctctccaaaaattgttaatgatggtgttactgttgcaaaa
gaggttgagttggaggacccagttgagaacattggtgctaagttagtgagacaagcggct
gccaagactaatgatttggctggtgatggaacaacaacatctgttgttcttgcacaaggt
cttattgctgagggtgtcaaggtggttgcagctggttcaaaccctgttttaattactcga
ggtattgagaagaccacgaaagctcttgtgtctgagcttaagttgatgtcaaaggaggtt
gaagacagtgagttggccgatgtagcagcagttagtgccggaaacaactatgaagtagga
aatatgatagctgaagccatgagtaaggtgggtcgtaagggtgtggtgaccctagaagag
ggaaaaagtgctgagaacagcctctatgttgttgaaggaatgcagtttgatcgtggttac
atctcaccttactttgtcactgatagtgagaaaatggcagttgaatttgaaaactgcaag
ctgcttcttgttgataaaaagataacaaatgcaagggatcttattaacgttttggaggat
gctatcagaggtggatacccaattattataattgcagaagacattgaacaagaagctcta
gcaactttggttgtgaacaagctgaggggggctctgaagattgctgcactgaaagctcct
ggttttggagagcgcaagagccagtaccttgatgacattgctattctcactggaggaact
gtaattagggatgaggtggggcttaccttagacaaagctgacaaggaagtgcttggcact
gcttcaaaggtggtgcttactaaggataccacaacaattgttggtgatggaagcacacag
gaagcagtaaacaagagggttgcacagattagaaatcttattgaggctgcagagcaagat
tatgagagggaaaaactgaatgaaaggattgcaaaattgtcaggtggagttgctgttatc
caggttggcgcacaaactgagacagagctcaaggaaaagaaactgagagtcgaagatgct
cttaatgcaacaaaggctgctgttgaggaaggtattgtagttggaggtggatgcaccttg
cttagacttgcatcaaaggtggatgccatcaaggacagccttgacaatgatgaagaaaag
gttggagcagatattgtcaaaagagctttgagttaccctttgaaattgattgctaagaat
gctggtgttaatggaagtgtggttagcgagaaggtgctttccagtgacaaccctaaatat
ggatataatgcggccactggaaattatgaagatttaatggctgctggaattattgatcca
actaaggtggttagatgttgccttgagcatgcatcctcggtagcaaaaacattcttgatg
tcagattgtgtagttgttgaaatcaaggagccagaaccaatgcctgctggcaaccccatg
gacaactcaggatatggctactaa
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