Castanea sativa (European chestnut): 142608654
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Entry
142608654 CDS
T11266
Name
(RefSeq) protein PELOTA 1-like
KO
K06965
protein pelota
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142608654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142608654
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
142608654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
PrpR_N
UPF0425_C
Motif
Other DBs
NCBI-GeneID:
142608654
NCBI-ProteinID:
XP_075636466
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Position
9:complement(5712627..5713739)
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AA seq
313 aa
AA seq
DB search
MKLMGKKNIVFNKPKTVKIIPKNQTTYGKITTARVKLNLKITITAVDYDKVSSTVRVQRK
NIKANEHVPTGSFHTLTLEKNKEFVLTKKVWDSVAVDTLREGCSMASSAGLAVVLMQQQG
LAHMFLVGKRVTTLCVKINGSTSNSNSNKFFENVFRAFVRHVDFSTIRCVIIGSPGCVKN
EFRGYLLSKAQRLKMKSIEDNKLHIVVATTSLSNTHNLSEVLNDNAVINLIRETNVVPEI
RVFKEFLDMVTRAFEIETRHKYVGLVKSVKKAGHKVFVLLSMHVSGEELAKLTDIAAILR
FPLPDLDVRAMQC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcatgggaaagaaaaacatcgtttttaacaaaccaaaaacagtcaagatcatc
cctaagaaccagactacctatggcaagatcaccactgctcgtgtcaagctcaacctcaaa
atcacaatcacagccgtcgattacgacaaagtttcatccaccgtgcgagtccagcgcaag
aacatcaaagccaatgaacacgttccaactgggtcattccatacgttaactcttgagaag
aacaaggagtttgttctcaccaagaaggtttgggactcggttgcggtcgacacgttacgt
gaaggttgtagcatggcttcgagtgctggcctggcagtggttctcatgcaacaacaaggt
ttggctcacatgttcttggttgggaaaagggtcaccacgctttgtgttaagattaatggt
tctacttctaattctaattctaacaagttttttgagaatgtctttcgtgcttttgtgagg
catgtggattttagtactatacggtgtgtcataatagggagtcctggttgtgtaaaaaat
gagtttcgaggttatttactctcaaaagcacaaaggctgaagatgaagtctattgaagac
aacaagttacacattgttgttgccactacaagtctgagtaatacacataatttgagcgag
gttttgaacgacaatgcagtcataaatttgatcagagaaacgaatgttgtgccagagatt
agggtatttaaggagttcttagacatggtaacgagagcgtttgagattgagacaaggcat
aagtatgttgggttggttaagtcagtgaagaaagccggccataaggtgtttgtgcttttg
tcaatgcatgtgtctggtgaggagctcgcgaagttgacagacattgcagcaattttgagg
tttccattgccagatcttgatgtgagggctatgcaatgttaa
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