KEGG   Castanea sativa (European chestnut): 142609352
Entry
142609352         CDS       T11266                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa00040  Pentose and glucuronate interconversions
csaa01100  Metabolic pathways
Module
csaa_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    142609352
Enzymes [BR:csaa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     142609352
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 142609352
NCBI-ProteinID: XP_075637041
LinkDB
Position
9:29336418..29340296
AA seq 434 aa
MAQQIRYLLPFFVFMLSFISCYSTLQKDPLRHFGEESGFKNVIKQSTHVLRLKRFDRILG
TISTSGKTINVNDYGAKGDGTDDTEAFKKAWEVACSTQGAVLVVPQKTYRLKPIRFLGPC
KSDLKVQISGTLEASNVRSDYSQDGRHWLLFDSVQNLIVEGGGTINGNGKIWWQNSCKVN
KALPCTVAPTALTFFECKYLTVNNLKIRDAQQIHTSFEKCMNIQVSLLTITAPEDSPNTD
GIHVADTQDIQISSCNIGTGDDCISIASGSQNVQARDITCGPGHGISIGSLGSGNSESYV
SGVTINGAKLYGTTNGVRIKTWKGGSGSASNIKFQNVEMHNVANPIIIDQNYCDQDKPCS
DQKSAVQVKNVLYQNIYGTSASDVAIEFNCSNSFPCQKILLQSINLEAEKGKKTEALCNN
VKSTDTGIVSPHCP
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggcccagcaaataagatatcttcttccatttttcgttttcatgctctctttcatttca
tgttatagcactttgcaaaaggacccacttcgtcattttggtgaagaatctgggtttaag
aacgtgatcaagcaaagcactcatgtcttacgtttgaaaaggtttgatagaatattgggt
accatttctacctcgggtaaaacaattaatgtcaatgactatggagctaaaggtgatggt
actgatgacacagaggcatttaagaaggcttgggaggtagcttgttcaacccaaggagct
gttctcgtggtgcctcagaaaacctatcgtcttaagccaattagattcttaggtccttgt
aaatctgatcttaaagtgcagatttctggaaccttggaagcatctaatgttcgatcggac
tacagccaagatggtagacactggctactctttgatagtgttcaaaatttaatagttgaa
ggtggtggaaccatcaatggcaacgggaagatatggtggcaaaactcttgcaaagtcaat
aaagctctgccttgcacggtcgcaccaacggctctaaccttcttcgagtgtaagtatttg
accgtgaataatttgaagatccgagatgcgcaacaaattcacacctctttcgaaaaatgc
atgaatattcaagtttctttgttgactataactgctccagaggatagccccaacactgat
ggaattcatgtcgctgacactcaagacatccaaatttcaagctgtaatataggaacaggt
gatgattgtatttcaattgcaagtgggtcccagaacgtgcaagccagagacataacctgt
ggaccgggtcatggaattagtattggaagcttaggatctggaaattcggaatcttatgtt
tctggtgtaaccattaatggagctaagttgtatggaaccacaaatggtgttagaattaag
acatggaagggagggtcaggaagtgcaagcaacatcaaatttcagaatgttgaaatgcat
aatgttgccaatcctataataatagaccaaaattactgtgaccaagacaaaccatgcagc
gatcagaaatctgcagttcaggtgaaaaatgtgctttaccaaaacatttatgggactagc
gcttctgatgttgccattgaattcaactgcagcaatagctttccatgtcagaagattttg
ttgcaaagcattaacttggaagctgaaaaagggaaaaaaaccgaagctttatgcaacaat
gtgaaatcgactgacacaggaattgtttccccgcactgcccatga

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