Castanea sativa (European chestnut): 142609437
Help
Entry
142609437 CDS
T11266
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142609437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142609437
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142609437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
WD40_WDHD1_1st
ANAPC4_WD40
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
Tricorn_2nd
eIF2A
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
PD40
Beta-prop_TEP1_2nd
DUF7397
Lactonase
Motif
Other DBs
NCBI-GeneID:
142609437
NCBI-ProteinID:
XP_075637135
LinkDB
All DBs
Position
9:complement(34501779..34510348)
Genome browser
AA seq
440 aa
AA seq
DB search
MPSFPHPGSVTICEINRDLITAESLSDDRAKDTYAKLLGMVFSPVPFQSNQVVLPGSEQD
TEQQGKGLISAFQGIFNDSFTRIFHPNDVNLLPEVDLHGVSWHQHKHIIAFVSGPSQVMV
HDYEDSEGKDPCILTNESQRDVKVLEWRPNSGRVLSVACKGGICIWAASFPGNAASVRPG
AVSFLGTNSRGSGVRYILVDFLRSPNDEQISALSWSPDGRYLASASYESSSFTVWDVAQG
VGTPIRRGLGGISMMKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGAAWDP
DGRMILIAFSGSSTLGSVHFASKPPSLDAHLLPVDLPEIMSLTGSQGIEKIAWDASGERL
AVSYKGGDELYRGLIAIYDARRAPLLSASLIGFIRGPGENPKPIAFSFHDKFKQGPLLSV
CWSSGFCCTYPLIFRSHVLP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtttcctcatcctggttctgtcaccatctgtgaaatcaatcgagacctcatt
accgcggagagcctctcagacgatcgagccaaagacacctatgccaaacttcttggaatg
gtgttcagcccggttccatttcagtcaaatcaagtggtgctgccgggttctgagcaggac
acagaacagcaaggaaagggtttaatatctgcatttcaggggattttcaatgactccttc
acacgcatttttcatcctaatgatgtaaacttgttaccggaggttgatcttcatggagta
agctggcaccaacataagcatattattgcatttgtatctgggccaagtcaagtcatggtt
catgactacgaggattcagaaggaaaggatccctgcattttgaccaacgagtcacaaaga
gatgttaaagtacttgagtggaggccaaacagcgggagggtgctttctgtagcatgcaag
ggcggaatttgcatttgggctgcttctttcccaggcaatgcagcatctgtgagacctggt
gctgtttccttcttgggaaccaactctaggggctctggagtccgatatattctggtggat
tttcttcgaagtcctaatgatgaacaaattagtgcactgtcatggagtccagatggaaga
tatttggcatccgcctcttatgagagctcatcatttaccgtttgggatgttgctcaaggt
gtggggacacccattcgacgaggattagggggtatttcaatgatgaagtggtcacctact
ggtgattacttttttgctgcaaaatttgacgggacattttatctttgggaaacaaacaca
tggacatctgaaccatggtcttcaactagtggatttgtcacgggagcagcgtgggatcct
gatgggcgtatgatactaattgctttctcagggtcgtcaacattgggatctgtacacttt
gcatcaaagcctccatcattagacgcgcacctattgccagttgatttgcctgagataatg
tctttgaccggcagtcagggcattgagaagatagcttgggatgcttcaggagagcgattg
gctgtatcttacaaaggtggggatgaactatacaggggtctgatcgccatatatgatgct
agaagggctcccctactttctgcgtcactaattgggttcattagaggacctggagaaaat
ccaaagccaatagcattttcatttcatgacaagtttaagcagggaccgttactttctgtg
tgttggagcagtggattttgctgtacctacccccttatatttcgttctcatgttcttccc
tag
DBGET
integrated database retrieval system