KEGG   Castanea sativa (European chestnut): 142609437
Entry
142609437         CDS       T11266                                 
Name
(RefSeq) aladin isoform X1
  KO
K14320  aladin
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142609437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csaa03019]
    142609437
Messenger RNA biogenesis [BR:csaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     142609437
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_THOC3 WD40_WDHD1_1st ANAPC4_WD40 WD40 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR19_1st Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_WDR3_1st Tricorn_2nd eIF2A Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st PD40 Beta-prop_TEP1_2nd DUF7397 Lactonase
Other DBs
NCBI-GeneID: 142609437
NCBI-ProteinID: XP_075637135
LinkDB
Position
9:complement(34501779..34510348)
AA seq 440 aa
MPSFPHPGSVTICEINRDLITAESLSDDRAKDTYAKLLGMVFSPVPFQSNQVVLPGSEQD
TEQQGKGLISAFQGIFNDSFTRIFHPNDVNLLPEVDLHGVSWHQHKHIIAFVSGPSQVMV
HDYEDSEGKDPCILTNESQRDVKVLEWRPNSGRVLSVACKGGICIWAASFPGNAASVRPG
AVSFLGTNSRGSGVRYILVDFLRSPNDEQISALSWSPDGRYLASASYESSSFTVWDVAQG
VGTPIRRGLGGISMMKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGAAWDP
DGRMILIAFSGSSTLGSVHFASKPPSLDAHLLPVDLPEIMSLTGSQGIEKIAWDASGERL
AVSYKGGDELYRGLIAIYDARRAPLLSASLIGFIRGPGENPKPIAFSFHDKFKQGPLLSV
CWSSGFCCTYPLIFRSHVLP
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgccttcgtttcctcatcctggttctgtcaccatctgtgaaatcaatcgagacctcatt
accgcggagagcctctcagacgatcgagccaaagacacctatgccaaacttcttggaatg
gtgttcagcccggttccatttcagtcaaatcaagtggtgctgccgggttctgagcaggac
acagaacagcaaggaaagggtttaatatctgcatttcaggggattttcaatgactccttc
acacgcatttttcatcctaatgatgtaaacttgttaccggaggttgatcttcatggagta
agctggcaccaacataagcatattattgcatttgtatctgggccaagtcaagtcatggtt
catgactacgaggattcagaaggaaaggatccctgcattttgaccaacgagtcacaaaga
gatgttaaagtacttgagtggaggccaaacagcgggagggtgctttctgtagcatgcaag
ggcggaatttgcatttgggctgcttctttcccaggcaatgcagcatctgtgagacctggt
gctgtttccttcttgggaaccaactctaggggctctggagtccgatatattctggtggat
tttcttcgaagtcctaatgatgaacaaattagtgcactgtcatggagtccagatggaaga
tatttggcatccgcctcttatgagagctcatcatttaccgtttgggatgttgctcaaggt
gtggggacacccattcgacgaggattagggggtatttcaatgatgaagtggtcacctact
ggtgattacttttttgctgcaaaatttgacgggacattttatctttgggaaacaaacaca
tggacatctgaaccatggtcttcaactagtggatttgtcacgggagcagcgtgggatcct
gatgggcgtatgatactaattgctttctcagggtcgtcaacattgggatctgtacacttt
gcatcaaagcctccatcattagacgcgcacctattgccagttgatttgcctgagataatg
tctttgaccggcagtcagggcattgagaagatagcttgggatgcttcaggagagcgattg
gctgtatcttacaaaggtggggatgaactatacaggggtctgatcgccatatatgatgct
agaagggctcccctactttctgcgtcactaattgggttcattagaggacctggagaaaat
ccaaagccaatagcattttcatttcatgacaagtttaagcagggaccgttactttctgtg
tgttggagcagtggattttgctgtacctacccccttatatttcgttctcatgttcttccc
tag

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