Castanea sativa (European chestnut): 142609688
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Entry
142609688 CDS
T11266
Name
(RefSeq) auxin response factor 8 isoform X1
KO
K14486
auxin response factor
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142609688
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Motif
Pfam:
ARF_AD
B3
AUX_IAA
BRWD_AD
SIS_2
PB1
At5g26805_C
Motif
Other DBs
NCBI-GeneID:
142609688
NCBI-ProteinID:
XP_075637465
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Position
1:51028699..51043200
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AA seq
854 aa
AA seq
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MKLSTSGLTQLDHEEKKCLNSELWHACAGPLVSLPTPGTRVVYFPQGHSEQVAASTNKEI
DGHIPNYPSLPPQLMCQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSK
QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRH
IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLS
SDSMHIGLLAAAAHAASTNSCFTVFYNPRSSIIYRASPSEFVVPLSKYVKAVFHTRVSVG
MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE
IEPLTTFPMYPSLFPLRLKRPWHPGVSSLHDNRDDAANGMMWLRGGSGEHGLHSLNFQGV
GLYPWMQQRMDPTLLGNDPNQQYQAMLAAGMQNLGNADLLRHQVMQFQQPFQYLQQQGSH
TSLLQQQQQQQQQPQTVPLNILQAQTQVLSENTPQHLIQQSLNNQQEDQARQQQQQQQQQ
HTYQNTLHIRSDQLHQRLQSNVPSSSFVKADFMDPSTKFSASISPRQNMVSSLCPEGSSN
ILNFSRVGQPMLAEQLPQQSWASKYTHSQVNAFANSMSHSPYPGKDATEEPENCNSDSQN
PTLFGVNIDSSGLLLPATLSTFATSVDADVSSMPLGHTGFQSSLYSSVQDSSELLNSAGQ
VDPPTPSQTFVKVYKSGSVGRSLDISRFSSYNELREELAEMFGIEGKFEDPLRSGWQLVF
VDRENDVLLLGDDPWEAFVNNVWYIKILSPEDVHKLGEQAVESFSPQGGQRLNSSSGEAQ
DLVSGLPSLGMLEY
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttcaacatcggggttgactcagctggatcatgaagaaaagaagtgcttaaat
tcggagctatggcacgcatgcgctggaccgctggtgtcccttccaactccggggactcgt
gttgtctactttcctcagggtcatagcgagcaggttgctgcctctactaacaaagaaatt
gatgggcacatcccgaattacccgagcttgccgccccagttgatgtgtcaactccacaat
gtcacaatgcatgcagatgtggaaacggatgaagtatatgcccagatgacattacagccg
ttgacgccggaagagcagaaggatacctttctccctatggaattggggattccgagcaag
cagcccaccaattatttttgcaagacattgacggcgagcgacactagtacccatggaggg
ttctccgttcctcgtcgtgccgctgagaaagttttccctccgttggatttctcacagcag
ccaccagctcaggaacttattgcaagggatctccatgatgtcgagtggaagtttaggcat
atttttcgaggacagcccaaacggcatcttcttactacaggctggagcgtgtttgttagt
gccaaaaggcttgttgcaggggattctgttctctttatctggaatgaaaaaaatcagctt
cttttgggaattcgccgtgccactcgtccacagactgtgatgccatcatctgttttatca
agtgatagcatgcatattggactcctagctgctgctgctcatgctgcttcaacgaatagc
tgttttacagttttttataacccacgctcttctatcatttacagggctagtccttctgag
tttgtcgtacccctttcaaaatatgttaaagctgtatttcacacacgagtgtcagttggg
atgcgcttccggatgctctttgagactgaagagtcaagtgtcagaaggtacatgggtaca
ataactggaataagtgatctggaccctgttcgttggccaaattctcattggcgatctgtt
aaggttggttgggatgagtcaacagcaggcgagaggcagccaagggtatctttatgggaa
attgaacctttaacaactttccccatgtatccgtcattgtttcccctcagactgaaacgc
ccatggcatcctggggtatcatctttgcatgataacagggatgatgcagctaacgggatg
atgtggctaaggggaggaagtggagagcatggtcttcactcccttaattttcaaggtgtt
ggtttgtatccctggatgcagcagagaatggatccaacattgcttggaaatgatcctaat
cagcagtaccaagccatgttggctgctggcatgcagaacctaggaaatgcagatctccta
agacatcaggttatgcaatttcagcagcccttccagtatcttcaacagcaagggagccat
acttcactcttgcagcagcagcaacaacagcaacaacaaccacaaacagttcctcttaat
atcctgcaggcacaaacccaagttttatcagagaacacgccacagcaccttatacagcaa
tcacttaacaaccaacaagaggatcaggcacggcaacagcaacagcaacagcaacagcag
catacctatcagaatacacttcatattcgtagtgatcagctgcatcagaggctgcagtca
aatgtgccttcttcatcttttgtgaaggcagacttcatggatccaagtacaaagttctca
gcatccattagccctagacaaaacatggtcagttcactttgtcctgaagggagtagcaat
attttgaacttctccagagttggtcagcctatgctagctgagcagttaccccaacaatca
tgggcttcaaagtatacacattcacaggtcaatgcttttgccaactcaatgtcacactca
ccttatcctgggaaagatgctactgaagagccagaaaattgtaactctgattctcagaat
cctactctttttggtgttaatattgattcatctggacttctactccctgccactctgtct
acttttgctacatcagttgatgctgatgtgtcctcaatgccattagggcataccggattt
cagagttctctgtacagttcggtgcaagactcctctgagttattgaacagtgcagggcaa
gttgacccaccaaccccatctcagacttttgtcaaggtttataaatcagggtcggttggg
cgctcactagacatctcccggttcagcagctataatgagctgcgagaggagctggcggag
atgtttggaattgagggaaagtttgaagaccctcttagatcaggctggcagcttgtattt
gttgacagggagaatgatgtgcttctccttggagacgacccttgggaggcgttcgtcaat
aatgtttggtatatcaagatactttcacctgaggatgtccataaattgggagagcaagca
gttgaatccttcagcccacaaggaggacaaaggctgaatagcagtagtggtgaagctcaa
gaccttgtctcagggctaccatctcttggcatgcttgagtactga
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