KEGG   Castanea sativa (European chestnut): 142609890
Entry
142609890         CDS       T11266                                 
Name
(RefSeq) replication protein A 14 kDa subunit B-like
  KO
K10740  replication factor A3
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03030  DNA replication
csaa03420  Nucleotide excision repair
csaa03430  Mismatch repair
csaa03440  Homologous recombination
csaa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    142609890
   03420 Nucleotide excision repair
    142609890
   03430 Mismatch repair
    142609890
   03440 Homologous recombination
    142609890
   03460 Fanconi anemia pathway
    142609890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csaa03032]
    142609890
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142609890
DNA replication proteins [BR:csaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    142609890
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     142609890
   MMR (mismatch excision repair)
     142609890
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     142609890
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 142609890
NCBI-ProteinID: XP_075637732
LinkDB
Position
9:complement(10689977..10694273)
AA seq 106 aa
MDTSNPSVFVNAELLRLYVGCRVRAVIQVLRSDGGVVTGKSTDENQIIVKGSPPVPLSNF
VEVIGIADTEKSIRAEIWSNFGNTFDTHTYNQLCQLANGEFKHLFL
NT seq 321 nt   +upstreamnt  +downstreamnt
atggatacgtcaaacccttcagtttttgtcaatgcagagctgctgcgcttgtatgtcggt
tgcagggtccgggcagtgattcaggttttgcgatctgatggtggagtagttacaggaaag
tctactgatgagaaccagataattgtaaaaggctctccacccgttcctctctcaaatttt
gttgaggttattggtattgctgacactgagaaatccatccgggctgaaatatggagcaac
tttggcaacacatttgacacacatacatacaatcagctttgtcaacttgcaaatggggaa
tttaaacatttgttcctttga

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