Castanea sativa (European chestnut): 142610224
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Entry
142610224 CDS
T11266
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142610224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142610224
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142610224
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142610224
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142610224
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142610224
Messenger RNA biogenesis [BR:
csaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142610224
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP60 / Chaperonin
142610224
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142610224
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142610224
Exosomal proteins of other body fluids (saliva and urine)
142610224
Exosomal proteins of breast cancer cells
142610224
Exosomal proteins of colorectal cancer cells
142610224
Exosomal proteins of bladder cancer cells
142610224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Transposase_24
Motif
Other DBs
NCBI-GeneID:
142610224
NCBI-ProteinID:
XP_075638096
LinkDB
All DBs
Position
9:24094222..24101532
Genome browser
AA seq
608 aa
AA seq
DB search
MASTFTAMSSVGSLAAPGCRVMDKKFASSSDKLSSSASISSFSFARRQNVMSQRNRSPKI
CAMAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
RGIEKTAKALVSELKLMSKEVEDSELSDVAAVSAGNNHEVGNMIAEAMSKVGRKGVVTLE
EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYDNCKLLLVDKKITNARDLINVLE
DAIRGGYPIVLIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGG
TVIREEVGLTLDKAEKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQ
DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
LLRLASKVDAIRDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNFK
YGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEQVPAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaactttcacagccatgtcttcagttggctccttggctgctccaggttgccgt
gttatggacaagaaatttgcttcttcttcagacaagttatcatcttctgcttccatttct
tcgttctcatttgctaggagacaaaatgtgatgtcacaaagaaatcgctctcccaagatt
tgtgccatggcaaaggaattgcatttcaacaaggacggctcagctattaagaagcttcaa
actggtgtgaacaagcttgcagatttagttggtgttactcttggtccaaaaggaaggaat
gttgttctggaaagcaagtatggctccccaaaaattgttaacgatggtgttaccgtggcc
aaagaggttgagttggaggacccagtggagaacattggtgctaagttagtgaggcaagcg
gctgccaagactaatgatttggctggtgatggaacaacaacgtctgttgttctagcacaa
ggtcttattgctgagggtgtcaaggtggtagctgctggtgcaaaccctgttttaattact
cgaggcattgagaagaccgcaaaagctcttgtgtctgagcttaagttgatgtcaaaggag
gttgaagacagcgagctgtctgatgtagcagcagttagtgccggaaacaaccatgaagta
ggaaatatgatagctgaagccatgagtaaggtgggtcgtaagggtgtggtgaccctagaa
gagggaaaaagtgccgagaacagcctttatgttgttgaaggaatgcaatttgatcgtggt
tacatttcaccttactttgtcacagatagtgagaaaatggcagttgaatatgataattgc
aagttgcttcttgttgataagaaaataacaaatgcaagggatcttattaacgttcttgag
gatgctatcagaggtggatacccaattgtgttaattgcagaagacattgaacaagaagct
ctagcaactttggttgtgaacaagctgaggggagctctgaagattgctgcactgaaagct
cctggttttggagagcgcaagagccagtaccttgatgacattgctattctcactggagga
actgtaatcagggaagaggtggggcttacgttagacaaagctgagaaggaggttcttggc
catgcttctaaggtggtgcttaccaaggatactacaacaattgttggtgatggaagcaca
caggaagcggtaaacaagagagttgcgcagattagaaatcttattgaggctgcagagcaa
gattacgagaaggaaaaactgaatgaaagaattgcgaaattatcaggtggagttgctgtg
atccaggttggtgcacaaactgagacagagctcaaagaaaagaaactgagagtcgaagat
gctcttaatgcaacaaaggctgctgttgaggaaggtattgtagtcggcggtggatgcacc
ctgctcagacttgcatcaaaggtggatgctatcagggacagccttgacaatgatgaagaa
aaggttggagcagatattgtcaaaagagctttgagttaccctttgaaattgattgccaag
aatgctggtgttaatggaagtgtggttagtgagaaggtgctttccagtgacaattttaaa
tatggatataatgcggccacaggaaaatatgaagatttaatggctgctggaattattgat
ccaactaaggtggttagatgttgccttgagcatgcttcctcagtggcaaaaacattcttg
atgtcagattgtgtagttgttgaaatcaaggagcctgaacaagtgcctgctggcaacccc
atggacaactcaggatatggctactaa
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