Castanea sativa (European chestnut): 142610256
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Entry
142610256 CDS
T11266
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142610256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142610256
Ubiquitin system [BR:
csaa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
142610256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Plexin_RBD
DUF2604
Dsc3_N
UBL_UBAC1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
142610256
NCBI-ProteinID:
XP_075638140
LinkDB
All DBs
Position
9:1020427..1022834
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AA seq
634 aa
AA seq
DB search
MSQIHLIKKKEKKPIRRSFNPSKMDRTKAAMNGDLHPEMQIFVETLSGEIITLEVESSDI
IANVKAKIKAAMSGDLHPKMQIFVKTLTGEITLEVESFDTIYNVKAKILDKEGTPLYEQR
LFLDCIQLKDHRTLADYNIQHESTLYLVCNRDRFNDFPFPEYDLIKEASTMQIFVKTLTG
EIITLEVERCDTIDNVKAKIQDKEGTPPEQQRLFLTGIRLKDDRTLAYYNIQQESTIHLV
CKQDLFKDFPFPEHILIKEVSTMQIFVKTLTGEIITLEVERCDTIDNVKAKIQDKEGTPL
DVQRLFFAGKQLEDGRTLVDYKIQRKSTIHLFDFSLPEYTLIKEASTMQIFVKTLTGEII
TLEVERSDTIYDVKAKIRDKEGTPPEQQRLFLAGIRLKDARIVADYPIGRESMLYLVCNW
DRFEDFPFPEDDIIEGASTMQIFLLNLRGEIFSLEVESSDTIDNVKAKIQDKEGTPLDQQ
RLIFAGNQLEDDRTLADYYIQQESVLHLVLRVRGGGGTGKKNKRLEDSKTLAYYNIRDGS
TLRIQQESTPPSVSRPSGHMKIFVETPSGDRITLEVESSDTIDNVKAKIQDKVKIPSDRQ
RLTFGGKELKDGRTLAECNIQKESTLHLALRGGQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagattcatctcatcaaaaaaaaagaaaagaaaccgattcgaagatccttcaat
ccttcaaagatggatcggactaaggctgcgatgaacggtgatctccatccagagatgcag
atcttcgtggaaaccctaagcggagaaatcatcaccctggaggtggagagctccgacatc
atagccaacgtcaaggccaagattaaggctgcgatgagcggtgatctccatccaaagatg
cagatcttcgtgaaaaccctaaccggagaaatcaccctggaggtggagagcttcgacacc
atatacaacgtcaaggccaagatcctggacaaggaaggcactcccctgtacgagcagagg
ctcttcttggactgtatacaattgaaggaccatcgtaccctcgccgattacaacatccag
cacgagtcaacgctctacctcgtctgcaaccgggaccgatttaacgatttcccattccct
gaatatgacctcattaaagaagcttcaacaatgcagatcttcgtgaaaaccctaaccgga
gaaatcatcaccctggaggtggagagatgcgacaccatagacaacgtcaaggccaagatc
caggacaaggaaggcactcccccggaacagcagaggctcttcttgaccggtatacgattg
aaggacgatcgtaccctcgcctattacaacatccagcaagagtcaacaatccacctcgtc
tgcaagcaagacctatttaaggatttcccattccctgaacatatcctcattaaagaagtt
tcaacaatgcagatcttcgtgaaaaccctaaccggagaaatcatcaccctggaggtggag
agatgcgacaccatagacaacgtcaaggccaagatccaggacaaggaaggcactcccctg
gacgtgcagaggctcttcttcgccggtaaacaattggaggacggtcgtaccctcgtcgat
tacaagatccagcgaaagtcaacaattcacctcttcgatttctcattacctgaatatacc
ctcattaaagaagcttcaacaatgcagatcttcgtgaaaaccctaaccggagaaatcatc
accctggaggtggagagatccgacaccatatacgacgtcaaggccaagatccgagacaag
gaaggcactcctccggaacagcagaggctcttcttggccggtatacgattgaaggacgct
cgtatcgtcgccgattaccccatcgggcgagagtcaatgctctacctcgtctgcaactgg
gaccgatttgaggatttcccattccctgaagatgacatcattgaaggagcttcaacgatg
cagatcttcctgttaaacttacgcggagaaatcttctccctggaggtggagagctctgac
accatagacaacgtcaaggccaagatacaggacaaggaaggcactcccctggaccagcag
aggctcatcttcgctggtaaccaattggaggacgatcgtaccctcgccgattactacatc
cagcaagagtcagtgctccacctcgtgttgagggtcaggggaggaggaggaacaggcaag
aagaacaaacggttagaagacagtaagaccctcgcctattataatattcgtgacggatcg
actctgcgtattcagcaggaatcgactccgccttcggtgtcgaggcccagtggacatatg
aagatattcgtcgagactccgagtggggacaggattactctggaggtggagagttctgat
acgatcgataatgtgaaggcgaagattcaagacaaggtgaaaatcccttcggataggcag
aggttgacctttggtggtaaggaattaaaggatgggaggactctcgctgaatgtaacatt
caaaaggagtccactcttcaccttgctcttcgcggtggccagtaa
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