Castanea sativa (European chestnut): 142610324
Help
Entry
142610324 CDS
T11266
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142610324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142610324
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
142610324
Prokaryotic type
Archaeal type
TFB
142610324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_8
WHD_GDS1
Motif
Other DBs
NCBI-GeneID:
142610324
NCBI-ProteinID:
XP_075638244
LinkDB
All DBs
Position
9:complement(43552106..43557893)
Genome browser
AA seq
312 aa
AA seq
DB search
MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGATGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVTKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPSWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgcgtattgctcagactgtaagcggcagacggaggtggtgttcgaccactcg
gccggcgacaccgtgtgttcggagtgcgggttggtgttggagtcgcactcgatcgacgag
acctccgagtggaggactttcgcgaacgagtcgggcgataacgacccggttcgtgtcggc
gggccgaccaacccgctcttggccgacggagggctctccaccgtcatcgccaagcccaac
ggcgccaccggagagttcctctcctcctccctcggccgatggcagaatcgcggttccaat
cccgatcgtggcctcattctagcgttcaaaacgattgcgactatgtccgataggttgggc
cttgttgcaaccattaaggaccgggctaatgagatatataagagggtggaagatcagaag
tctagtagaggaagaaatcaggatgctctattggctgcttgtctgtacattgcttgtcgg
caagaagacaagccacgcactgtaaaggaaatatgctctgtcgctaatggagccacaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactggggttggagaatggtcag
tcggtggagatgggaacaatacatgctggggactttatgaggcggttttgttccaatctt
ggtatgaataatcaagcggttaaagctgcccaggaagctgttacaaaatcagaagagttt
gatataaggaggagccctatatcaattgcagcagcagtaatttatattatcactcagcta
tcagatgacaagaaacctctcaaagatatttcagttgccactggagttgcagaagggaca
ataagaaattcctacaaggatctttatccccatgtatcaaagataataccaagctggtat
gctaaggaggaggatctgaagaatctttgcagcccttga
DBGET
integrated database retrieval system
