Castanea sativa (European chestnut): 142610329
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Entry
142610329 CDS
T11266
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00906
Carotenoid biosynthesis
csaa01100
Metabolic pathways
csaa01110
Biosynthesis of secondary metabolites
Module
csaa_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
142610329
Enzymes [BR:
csaa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
142610329
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
HI0933_like
FAD_oxidored
Thi4
GDI
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
142610329
NCBI-ProteinID:
XP_075638247
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Position
9:22867956..22875343
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AA seq
699 aa
AA seq
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MFVSHTLSMPVFGHKSQFFNHQNTTRLGTIRPTNQNHKFQFFFTQNYVGLSGHKLCDLNS
QFFDECYAKKSNRIRPRSKKHKLLSLRHAKTLVVNDYQPNSMELCFHRITRLGTSRPRNL
ESKFLSGGPLRISNSKSYKLGSREIGCSEANMRNGKFIVRSKSVLSVEKAAEREGIGREA
SYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGF
SDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNSLSVQVHRDYGEFVAELTNKFPHEK
EGILKFYGECWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIARKF
IKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGISKSLAKGL
VDQGSEILYKANVTSIIIDQDKAVGVRLSDGREYFAKTIISNATRWDTFGNLLKGEHLPK
EEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLENDWTRLEEPYGSIFLSIPTVL
DSSLAPEGRHILHIFTTSSIEDWEGLPPKDYEAKKELVADEIIRRLEKKLFPGLRSSIVF
MEVGTPKTHRRFLARDKGTYGPMPRGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAV
AFSGVMCAHRVAADIGLEKKSPVLDAALLRLLGWLRTLA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtctcccacacactttccatgcctgtgtttgggcacaagtcccagtttttcaat
caccaaaataccacacgattgggtactataagacccacaaatcaaaatcacaaatttcag
tttttctttactcaaaactacgtaggtttaagcggtcacaagctctgtgacttgaattct
cagttttttgatgagtgttatgctaaaaagtcaaatagaatccgacccagaagtaaaaaa
cacaagcttttatctctgagacatgctaaaaccttagttgtcaatgattaccagccaaat
agcatggaattgtgttttcacaggatcacacggttgggcacttccagacccagaaattta
gagagcaagtttctatctggtggtcctctgagaatttcaaactccaaaagttacaagctt
ggtagtagagaaattgggtgttcagaggcgaatatgagaaatgggaaattcatagtgagg
tcaaagtcagtgttgagtgtagaaaaagcggcagagagagaaggaataggtagagaggct
tcttatgatgcgattgttattggttctgggattggagggttggttgcggcaacacagttg
gcagtgaagggagctaaggttttggttttggagaagtatgtgatccctggtgggagctct
ggctattacgaaagagatggctatacttttgatgttgggtcttctgtaatgtttggtttc
agtgacaaggggaatctaaatttgataacccaagcattggcagcagttggatgtgagatg
gaggtgatacctgatccaactactgtccatttccatttacccaatagcttgtctgtccag
gtgcacagagattatggtgaatttgttgcagaactcaccaataagtttccccatgagaag
gaagggatcctcaagttctatggtgaatgctggaagattttcaatgccttgaactcattg
gaattgaagtcacttgaggagccaatctacctttttggacaattttttcagaagcctctc
gaatgcttgacacttgcctattatttgcctcaaaatgctggagatatagctcgaaaattc
attaaggatccccagttattgtctttcatagatgcagagtgtttcatagtgagcacagtc
aatgctttgcagacaccaatgatcaatgcaagcatggttctatgtgacagacattttgga
gggattaactaccctgttggtggtgtcggtggaatttcaaagtccttagcaaaaggcctg
gttgatcagggcagtgaaatactttacaaggcaaatgtgactagcattataattgatcag
gacaaagctgtaggagttaggttgtcagatggaagggagtattttgccaaaaccataata
tcaaatgctactagatgggatactttcggaaatctcttaaaaggagaacaccttccaaaa
gaagaagaaaattttcagaaagtttacgttaaggcgccatcttttctttccatacacatg
ggggttaaagctgaagtgctgccaccagatactgattgccaccattttgtacttgagaat
gattggacaaggttagaagagccatatggaagtatatttttgagcattccaactgtcctt
gattcatctttggctccagaaggacgtcatattcttcacatctttaccacttcttccata
gaggactgggagggtcttcctccaaaagactatgaggcaaagaaggagcttgttgcagat
gaaatcattagaagattggagaaaaaactatttccagggctgagatcatcaattgttttt
atggaggtgggaacaccaaagacacacagacgattcctggctcgtgataagggtacctat
ggaccaatgccacgcggaactcctaagggattactaggaatgccattcaatacaactgct
atagatggtctttactgtgttggcgatagctgctttccgggacaaggtgttatagctgtg
gccttttcaggagtaatgtgtgcccaccgagtagctgctgatattgggcttgagaagaag
tccccagtattagatgctgccctccttcgacttcttggttggttaaggacattggcatga
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