Castanea sativa (European chestnut): 142610524
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Entry
142610524 CDS
T11266
Name
(RefSeq) putative E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142610524
04121 Ubiquitin system [BR:
csaa04121
]
142610524
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142610524
Membrane trafficking [BR:
csaa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
142610524
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142610524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-Nse
CxC4
Prok-RING_1
Rad50_zn_hook
zf_RING_Vps8_fungal
HypA
Motif
Other DBs
NCBI-GeneID:
142610524
NCBI-ProteinID:
XP_075638453
LinkDB
All DBs
Position
9:35099384..35103261
Genome browser
AA seq
312 aa
AA seq
DB search
MSSGRNTHWCYRCNRPVRLRGRDAACPSCNGGFVQELDDMMRVSPFDLFGLDIDEDRDRR
LGLMEAFSAFMRQRLADRSRGHDIRARSDAVPEHAPGLGPLLIFGGQIPIRLSGNGGVEA
LFNGTPGIGLTRGNAGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPTIKITQRHL
RSDSHCPVCKDKFEMGSEARQMPCNHMYHTDCIVPWLVQHNSCPVCRQELPPQGSSSGRS
SNSRSRSNNYSSNADGRENNRETQGRRNPFSYLWPFRSSTSSSNHNGAASAGSSSPTIHE
NEMGYSGWPFDY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggcagaaacacccattggtgttaccgctgcaaccggccagttcgactgcgc
ggacgagatgcagcctgccccagctgtaatggaggatttgttcaagaacttgatgatatg
atgcgtgtcagcccatttgatttatttggactggacattgatgaagatcgcgataggagg
ttggggcttatggaagctttctctgcttttatgaggcagcgattggcagacagaagccgg
ggacatgatatcagggcaagatcagatgcagttccggaacatgctcctggtttaggtcct
ttgctgatctttggtggccaaattcctattaggttgtctggaaatggtggagttgaagct
cttttcaatggaactccagggattggtcttacacggggtaatgctggtgattatttcata
ggtcctggactggaagagctgtttgaacagctttcagctaatgatcggcgaggccctccc
ccagcatctagatcttccattgatgcaatgccaactattaagatcacacagaggcatctt
cgttccgattcacactgtcctgtttgcaaagataaatttgagatggggtctgaagcaagg
caaatgccatgtaatcatatgtatcacacagattgtattgtcccatggctcgttcagcac
aactcatgccctgtatgccgccaagaactgccaccacaaggatcgagtagtggccgtagc
tcaaatagtcgaagtagaagcaacaactatagcagtaatgctgatggaagggaaaataat
agggagactcaaggaagaaggaaccctttctcctatttgtggccattccgctcatctact
tctagctctaatcataatggagctgcttccgctggaagcagctctccgactattcatgaa
aacgagatgggttactcaggatggccttttgattattag
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