KEGG   Castanea sativa (European chestnut): 142610699
Entry
142610699         CDS       T11266                                 
Name
(RefSeq) ras-related protein Rab5 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa04144  Endocytosis
csaa04145  Phagosome
csaa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142610699
   04145 Phagosome
    142610699
   04148 Efferocytosis
    142610699
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csaa04131]
    142610699
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csaa04147]
    142610699
   04031 GTP-binding proteins [BR:csaa04031]
    142610699
Membrane trafficking [BR:csaa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    142610699
 Endosome - Lysosome transport
    142610699
Exosome [BR:csaa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142610699
  Exosomal proteins of other body fluids (saliva and urine)
   142610699
  Exosomal proteins of colorectal cancer cells
   142610699
  Exosomal proteins of bladder cancer cells
   142610699
GTP-binding proteins [BR:csaa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    142610699
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA TsaE AAA_24 AAA_16 AAA_29
Other DBs
NCBI-GeneID: 142610699
NCBI-ProteinID: XP_075638720
LinkDB
Position
1:57582931..57625329
AA seq 202 aa
MAATTIAHNTHNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDAT
VKFEIWDTAGQERYHSLAPMYYRGAAASIIVYDITNAESYARAKKWVQELQKQGNPNMVM
ALAGNKTDLEDKRRVTAEEARAYAGENGLFFIETSAKTSVNVNDIFYEIAKRLPRAQPAQ
NPAGMVLVDRPAEGSQAASCCS
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcggctactacgatcgcacacaacactcacaacgcaaagctggttttgctgggtgac
atgggcgctggtaaatctagcctcgtcctgcggttcgtcaagggccaattccttgaattt
caggaatcaaccataggagcagcgtttttctcgcaaacgcttgcggtgaatgatgcaacg
gtgaagtttgagatatgggacacagctggacaagagagataccatagcttggctccaatg
tattacagaggtgctgctgcttccatcattgtctacgatatcaccaatgctgagtcatat
gcacgggcgaagaagtgggtacaagagcttcagaagcaaggaaatcctaacatggttatg
gcccttgctggaaacaaaactgatttggaagataagaggagagttacagctgaagaggca
cgtgcatatgctggtgaaaatggactctttttcattgagacctctgccaaaacatctgtc
aatgtcaatgatatattttatgaaatagctaaaaggttgcctagagctcagcctgctcag
aacccagcagggatggtccttgtggatagacctgcagaaggatcccaagctgcatcatgc
tgttcataa

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