Castanea sativa (European chestnut): 142610705
Help
Entry
142610705 CDS
T11266
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142610705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142610705
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142610705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_12
Motif
Other DBs
NCBI-GeneID:
142610705
NCBI-ProteinID:
XP_075638732
LinkDB
All DBs
Position
9
Genome browser
AA seq
863 aa
AA seq
DB search
MATDQDMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNLRSYNDYMLKVLEEDWQKEKRDFLQSLSRISTLPRTNMIDSSTGATHPGQMVSIAS
SPQRSSGPSSMDLVPLANKPIIEKKASVYAVVVKNLNNARERGLPFKPGTAFKSAYESLG
LEGSSGKSVNLQKIWQLIQMLMGEDSTVQRNVSKKMSLAIGARRHLEWGHEKYIMDTIQS
HPAQAALGGVVGNLERVRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGYY
DEARKVALSSRASHQFAPLLTEWINTRGMVPAETAAAASEECEKMLRMGDRVGRAAYDKK
KLLLYAMISGSRRQIDRLLRDLPNLFNTIEDFLWFKLSAVRDCPSGVSSAVLNEGLVPYS
LDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKETGGGGYNIDAAHMS
IVLADHGVLSEGIGAGQKLGVMDAFAEASSMIRQYGSMYLRSGDLSTALEYYAQAAAAVG
GGQLSWTGRGNVDQQRQRSLMLKQLLTELLLRDGGIYLLLGSRGTGEEGELGRFLTDAKA
RHQFLLEAACQCQEAGLYDKSIEIQKRVGAFSMALDTINKCLSEAICALSRGRLDGESQT
AGLIHSGNEILETYRYYPEVSPQEREHVLAQQTVLRQLEAILSIHKLARLGHHLDALREV
AKLPFLPLDPRAPDATIDVFQNLSPHVQDCVPDLLKVALTCLDNVADSDGSLRALRAKIA
SFIANNLKRNWPRDLYEKVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgatcaagacatgagtggttggaccgatctgcttcactcttccaccaagcta
ctcgaacaagccgcgccttccgctcagttccctcctcttcagagaaacttagatcagtta
gaggcattatcaaagaagctcaaagctaaaaccctgcgaactgaggctccttcccaatct
attgctgccacaaggctacttgcgcgcgagggaataaatgcggagcaacttgcgcgggat
ctgaagtcttttgaattgaagacaacgtttgaggatgtttttcctgctgaggcaacaagt
gtcgaagagtatttgcagcaggttcatgagatggcaatggtctctgccattcaggaagct
cagaaggataacctcagaagctataatgattacatgttgaaagttttggaggaggattgg
caaaaagaaaaacgtgattttctacagagtttaagccgaatttcaacgttacccaggact
aacatgattgattccagcactggggctactcatccaggtcaaatggtgtccattgcgtct
agccctcaacgttcatctggtccatctagcatggaccttgtacctctagctaacaagcct
attattgagaaaaaggcatcagtctatgctgtagtcgtgaagaatttaaataatgcaagg
gagcgtggcttaccatttaagcctggtacagctttcaagagtgcttatgaaagtttgggt
cttgagggatccagtggaaaatccgttaacttgcagaagatatggcaactcattcagatg
ctaatgggtgaagattcaactgtgcaacgcaatgtatcaaaaaagatgtcactagccatt
ggtgcaaggcgccacctggaatgggggcatgagaagtatatcatggatacaatacaaagt
catcctgcacaggctgctcttggtggggtggttggaaatttggaaagagttcgcgccttt
cttcggatacgtttaagggattatggagttctggattttgatgcaggcgatgcccgtaga
cagcctcctgttgataccacctggcagcagatctatttttgcttgagaactgggtattat
gacgaagcgagaaaggttgctctgtcatcccgtgcttcacatcaatttgctcccctgctt
acagaatggataaatactagaggtatggtgcccgctgagactgcagctgccgcctcagaa
gaatgcgaaaaaatgttaagaatgggtgatagggtgggccgagctgcatatgacaagaaa
aagttgttgctctatgctatgatatctggttctcgcaggcaaattgaccgcctgcttaga
gatctaccaaatttgttcaatactatagaggatttcttatggttcaaactgtctgctgta
cgggactgcccgagtggggtctcatctgctgttctgaatgaggggttggtaccatacagt
ttggatgatttgcaggtctacctgaacaaatttgatccatcatattatacaaaaaatgga
aaggaccctctggtatacccttatgttttgcttttaagcatccagttgctaccagctgtc
ttatacttgtctaaggaaacaggaggtggaggatataacattgatgctgctcacatgtca
attgtgttagcagaccatggggtcctttctgaaggtattggtgctgggcaaaaactggga
gtgatggatgcttttgcagaggcatctagcatgattaggcagtatggatctatgtactta
cgtagtggtgatctatcaacagcattagaatattatgcacaagctgcagctgctgtgggt
ggcggacagttgtcatggactggaagaggtaatgtggatcagcaaaggcagagaagcttg
atgttaaagcaactccttacagagctgttgttacgggatggtgggatctatcttttactt
ggttcaagaggtactggagaagaaggtgaattgggaaggtttttgactgatgcgaaagca
agacatcaatttctgcttgaagctgcttgtcagtgtcaggaagctgggctttatgacaaa
tcaatagaaattcagaagagagttggggcattttcaatggcactggatactatcaataag
tgcctctctgaagcaatatgcgccctctcacgtggtagattagatggtgagagccagact
gctggcctcattcattcaggcaatgaaatactggagacatacagatattatcctgaagtc
agtcctcaagagagagagcatgttttagcgcaacaaaccgtgttaagacaacttgaggca
atattgtcaatccacaagttggcaagattgggccatcatctagatgctttgagggaggtt
gctaaacttccatttcttccattagatccacgagcaccggatgctaccatagatgtgttc
cagaatttatcacctcatgttcaagattgtgttccagaccttctgaaggttgctcttact
tgcctggacaatgtagcggattctgatggatcacttcgtgccttgagggctaagattgca
agctttattgctaataacttgaaaaggaattggcctcgcgatttgtacgaaaaggttgcc
cgaagcttgtga
DBGET
integrated database retrieval system
