Castanea sativa (European chestnut): 142610927
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Entry
142610927 CDS
T11266
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142610927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142610927
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142610927
mRNA degradation factors
5'-3' decay
Decapping complex
142610927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
142610927
NCBI-ProteinID:
XP_075639031
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Position
9:11161802..11166898
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AA seq
366 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRIDPFIEEILITAAHVTFYEFNIESNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNASQEVNGIWFYNP
RECDDVANLFSRILNAYSKVPTKSKVSSSKSEFEELEAVPSMSLMEGPLEPSSSATDAPE
DSSFRNLFNTAMNIGAPNVVNSRQLSPPYHSSAALPLSSHSSSVVSSTAPTPQVPSLSLS
APSNPTPLQDTVDPVGSSNLVTNLLKPSSFFAPPSSSALIMPPISSSIPTAPVLHPPLNL
QRPYGTPMLQPFPPPTPPLSLTPSSSPTNDGLLISRDKVRDALLMLVQDDQFIDMFCKAL
VKVQHP
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagacagggaaattgatgccgaatctggatcaacagagcacaaaaatgctcaac
ctcactgtgctccaacgaatcgatcccttcatcgaagagatcttaatcaccgccgcacac
gtcaccttctacgagttcaacatcgagagcaaccaatggagtcgcaaagacgttgaagga
tctctttttgttgttaagaggaatactcaaccacggttccaattcattgtaatgaatagg
cgtaacacagataacctagtggagaatctcttgggagattttgagtatgaagttcaagtt
ccatatctgttgtaccggaatgcatcccaagaagttaatggaatttggttttacaatcca
cgggagtgtgacgatgttgcaaatctatttagtaggatacttaatgcatattcaaaagtt
cctacaaagtcaaaagtatcttcaagcaaaagtgagtttgaggaacttgaagcagtccca
tccatgtcattaatggaaggtcctctggaaccatcatcatctgccactgatgcacctgaa
gattcttcctttcggaatctttttaatacagctatgaatattggagctccaaatgtagtg
aactctagacagctgtcaccgccctatcattcttctgcagctctccctttatcttctcat
tcatctagtgttgtttcttctactgctccaactccacaagtaccatcactttctctttca
gcgccatctaatccaaccccccttcaagacaccgttgatccagttggcagcagcaatctg
gtcactaatcttctgaagccctcttctttttttgcacccccgtcctcatcggccttgata
atgccgcctatttcttcatctataccaactgctcctgtccttcaccctcccctgaatctg
caacgtccatatggcactccaatgcttcaaccctttccaccacccactccaccattgtcg
cttactccgagttcttctcctacaaatgatggacttcttattagcagagacaaagttcgc
gatgcacttctgatgcttgttcaggacgatcaatttattgacatgttttgcaaagcatta
gtgaaggtgcaacatccttga
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