Castanea sativa (European chestnut): 142610934
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Entry
142610934 CDS
T11266
Name
(RefSeq) putative DNA helicase MCM8 isoform X1
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csaa03032
]
142610934
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142610934
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
142610934
DNA replication proteins [BR:
csaa03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
142610934
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142610934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
AAA_5
Mg_chelatase
AAA_3
Sigma54_activat
AAA_16
AAA_30
cobW
DUF1980_C
Motif
Other DBs
NCBI-GeneID:
142610934
NCBI-ProteinID:
XP_075639040
LinkDB
All DBs
Position
9:complement(3612892..3621015)
Genome browser
AA seq
793 aa
AA seq
DB search
MGMGSRSGSGSGDPSGYMDILASYFPQQLFPTIEDDCLNLTSALFSFFSTPLALNLASQV
KDEDGVFVLSIDFQQFRKVCDLEEFYIMLEDKPKVALLCMSAAIHKVVLNNLEKNMMVDG
AKINIRLHNYPETMIALKNLKAAYIDKLVSVRGTVVKASTVRPLVVQMSFDCAKCKTEIT
RIFPDGKFSPPQSCDLYGCKSKNFNPIRSTALTIDFQKIRLQELLKPEDHEEGRVPRTVE
CELTQDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKSKNQGFYYLYLEAVSIKNSKSQ
STPEDSQDSNSKARATELCNLFSFSPRDLEFVVKFKEENGSDIFRQILQSICPSIYGHEL
VKAGITLALFGGVRKHSKDRNKVPVRGDIHVIVVGDPGLGKSQILQAAAAVSPRGIYVCG
NATTKAGLTVAVVKDSMTSDYAFEAGAMVLADGGLCCIDEFDKMSAEHQALLEAMEQQCV
SIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDE
FLDKRVSEHIMSLHSGHGELSPAAKKLRRDAASQNAQGINVSVKGGSLVSQWRLDPKKDF
DFVPLPAQLLRKYIAYARTYVFPRMSKPAAGILQKFYLQLRDRNTSADGTPITARQLESL
VRLAEARARLDLREEITTQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRF
LSALNKQSELDQKDCFSISEIYSLADRIGLRVPDIDTFVDNLNSVGYLLKKGPKMYQVLS
SSYSRSQSSRSRG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggggatggggtcaaggtccgggtccggatccggtgacccaagcgggtacatggatatc
ctggcttcatactttccccaacagcttttcccaacaatcgaagacgactgcctcaacctc
acttctgctctcttttccttcttctccactccacttgccctaaatctcgcttctcaggta
aaagatgaggatggcgtcttcgttttgtcaattgacttccaacaattccggaaagtatgt
gatctcgaagagttttatataatgctagaggataaacctaaggtggctctcttatgcatg
agtgctgcaattcacaaggttgttttgaataatttggagaaaaacatgatggtagatggt
gcgaaaataaatatacgtctgcacaattaccctgaaactatgattgccctgaagaactta
aaagcagcttatattgacaagcttgtatccgtgcgtggtactgtagtaaaggctagcact
gtcaggcctctagtggtgcaaatgagttttgattgtgcaaagtgcaaaactgaaattacg
cgtattttccctgatgggaaattttcgccaccacaaagttgtgatttatatggatgcaag
agcaagaattttaatccaattcgatctactgctctaacaatagattttcagaaaataagg
ctgcaggaacttttaaagcctgaagatcacgaagaaggtcgagttcctcgaacggtagag
tgtgaactaacccaagatcttgttgatgcatgcatacctggagatgtggtgactgtcact
ggaattatcagagtaattaataattacatggatattggaggaggaaaatcgaaaagcaaa
aatcaagggttctactacttgtatctagaagcagtttcaataaaaaactccaagtcacag
tctacacctgaggattcacaagattctaattctaaagctagagctacggagctgtgtaat
ttattctcattttctccaagggatttggaatttgttgtgaagtttaaagaggaaaatggc
tccgatatcttcaggcaaatacttcaatctatatgtccttcaatctacggacatgaactt
gttaaagcgggcataacattagcactgtttggaggtgttcggaagcattccaaggatcgg
aacaaggtccctgttagaggagacattcatgtcatagttgttggtgatcctggactagga
aagagccaaatactgcaagcagcagccgctgtttctccacgtggcatttatgtatgtggc
aatgccactacaaaagctggcctcactgtagctgttgtgaaggattccatgacaagtgac
tatgcttttgaggcaggtgccatggtccttgcagacggtgggttgtgctgcattgatgag
tttgacaaaatgtctgcagaacatcaggctctactggaagccatggaacaacaatgtgtc
tccattgcaaaggctggactggtagcaagtttatctgcccgaacttcagtcttagcagca
gcaaaccctgttggtggtcattataaccgagcaaaaactgtgaatgaaaatttgaaaatg
agtgctgcactcctctcacgatttgatctggttttcatattacttgataaacctgatgaa
tttctggataagcgagtctcagagcacatcatgtcgcttcattctggacatggagaactt
tcaccagctgcaaaaaagctacggagagatgcagcatcacagaatgctcaaggcataaat
gtgagtgtaaaaggtggttctttagtttctcagtggagacttgacccaaagaaagatttc
gattttgttccactaccagctcaacttcttcgcaaatatattgcttatgctcgaacttat
gtctttcctaggatgtcaaagccggcagcaggaatcctgcagaagttttacttacaactt
agagaccgtaatacatcagctgatggtacaccaataactgccaggcaactggaaagtcta
gtcaggctggcagaggctcgagctcggctagacttaagagaagagataacaacccaagat
gcaatggatgtggttgaaataatgaaagaatccttgtatgacaagtatgttgatgagcat
ggttttgtggattttggtcggagtggggggatgagtcaacagaaagaagcaaaacggttt
ttaagtgctctcaataagcaatcagaattggatcagaaagattgcttttcgatttctgaa
atttacagcttggcagataggattggtcttagggttcctgatattgacacatttgtggat
aatttaaacagtgtgggttatctactcaagaagggaccaaagatgtatcaggtgctgtcc
tcatcttattcacgaagtcaatcatcaaggtcgaggggctaa
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