Castanea sativa (European chestnut): 142611099
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Entry
142611099 CDS
T11266
Name
(RefSeq) lethal(2) giant larvae protein homolog SRO77-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142611099
Membrane trafficking [BR:
csaa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142611099
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
142611099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
WD40
WDR55
Synaptobrevin
Beta-prop_IFT140_1st
Lgl_C
WD40_MABP1-WDR62_1st
Galaxin_repeat
Motif
Other DBs
NCBI-GeneID:
142611099
NCBI-ProteinID:
XP_075639243
LinkDB
All DBs
Position
9:complement(15474821..15487127)
Genome browser
AA seq
1115 aa
AA seq
DB search
MLAAKRLIQKAVQHHQRKVQHGDLTTEDLDPRIAVHYGVPSTASVLAFDPIQRLLAIGTL
DGRIKVVGGDGIEGLLISPNQLPYKHIEFLQNKAYIVSISNDNDIQVWDLESRSIADSLQ
WASNITAFSVISGSHFMYVGDEHGLMSVIKFEAEDGKLFQLQYHISADSISEAAGFPLPN
DQPIIGVLPQLCSSGNRVLLAYQNGLIILWDISEGQILFVGGGKDLQLKDGVVDSSSEVD
ANLPDATLEHHLEEKEISALCWASSNGSILAVGYIDGDIFFWNTSCAASSKSQQASSSNN
IVKLQLSSAERRLPVIVLQWSKNQKSHNDCDGQLFIYGGDEIGSEEVLTVVSLEWLTGTL
RCVGRAELKLSGSFADMILLPNAGAMGGNQKADLFVLTNPGQLHFYDDASLSALISQRER
RPSISAIEFPAVVPSSNPSMTVAKLSKIPTGGDSSKALLEVASVMKLASTVTAVSAAKWP
LTGGLPSELSITKNDGVGRIYLAGYSDGSIRIWDATYPVLSLICLLEGEVQGVKVAGSSA
PVTKLDFCSISLRLAVGNGYGLVRLYDLKGCSDGTHFHFVTETKNEVHILPQGKGPQCRA
IFCLLNSPIQALQFANCGAKLAVGFESGRVAVLDTSSSLLLFWIDGVSCSSFPIISITWK
ELTYTHSLVKSPKHSETKVPAYSSEEVIFVLTKDARINLFEGGTGKIIGTQPWHLKKPSV
AISMYVIAVSISVSESSNEQPESHEDSATKKEPVSNSTTVSINSHEGVQQPSSETACSEE
RLLDSILLLCCEDSLRLYSTKSVIQGNNKSIRKVKHAKPCCWTATLRKDEKVCGLVLLFQ
TGVIEIRSLPDLELVKESSLVSILRWNFKANMDKTMSSSDNGQITLASGCELAFISLLAG
ENDFRIPETLPRLHDEVLAAAADAALSFSLNPKNKQGTKPGILGGIIKGFKGRKVPHTED
LILNPKVNFSHLEGIFLKSPFSDSSPAVTDNQEAEELNIDDIEIDEPLPVASSSSYDFQN
IKTEKGTERERLFQGGTDDTKPRLRTPEEIIATYRKAGDASSVAAHARDKLVQRQEKLEK
ISRRTEELQSGAEDFASLANELVKTLEARKKWWHI
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgttagccgcaaagcgattgatacagaaagctgtgcagcaccatcagcgtaaagtgcaa
catggtgatttgacaacggaagacttggatccgaggattgctgttcactatggcgttcca
tctacggcttcggttcttgcatttgaccccattcagcgccttttggccattgggactctg
gatggaagaattaaagttgttggtggagatggtattgaaggacttttgatatccccaaac
caattgccttacaaacacatagagtttctacaaaacaaggcatatatagtcagcatttca
aatgacaatgatattcaggtttgggatcttgagagcaggagtatagctgattctttacag
tgggcatccaatataactgctttttctgtgatcagtggctcccacttcatgtacgttggt
gatgagcatggtttgatgtctgtgataaagtttgaggccgaagatggaaaacttttccag
ttgcaatatcatatttctgcagattctataagtgaagccgctgggttcccccttcctaat
gaccaacctatcattggcgttcttcctcaactgtgttcttctgggaatagagtattgctt
gcatatcagaatggattgattattctttgggatatttctgaaggtcaaattctctttgtt
ggaggtggtaaggatctccaattgaaggatggagtagttgattcttcaagtgaagtggat
gctaatcttcctgatgctacattggaacatcatcttgaagagaaagagataagtgctctt
tgttgggcatcttccaatgggtccattctggctgtgggatacattgatggggatattttt
ttttggaacacatcgtgtgctgcatctagtaaaagtcaacaagcttcatcatctaacaat
attgttaagctacaattgtcatctgcagaaaggagactccctgtcatcgtcttacagtgg
tccaaaaaccaaaaatcccataatgattgtgatggccaactttttatctatggtggtgat
gaaataggatctgaagaagttttgacggttgtatctcttgaatggttaacagggacatta
agatgtgttggtcgtgcagagcttaaacttagtggctctttcgcagacatgattttatta
ccaaatgctggggcgatggggggtaaccaaaaagctgatctctttgtgttgacaaaccct
gggcaattacatttctatgatgatgctagcctatctgccttaatatctcagcgtgagaga
agaccatccatctctgcgatagagtttcctgcagtggtaccttcatctaatccttccatg
actgtggcaaagctcagtaagatacccactgggggggactcatcaaaggctttgttagag
gtggcctcagttatgaaacttgcctcaacagtgactgcagttagtgctgccaagtggccc
ttgactggaggtttacctagtgaattgtctattactaaaaatgatggggttgggagaatt
tatttagcaggttattctgatgggtcaattcggatatgggatgccacgtatcctgtctta
tctttaatctgtcttttagaaggcgaggtacaaggtgtgaaagtggctggttcaagtgct
ccagtaacaaagttggacttctgctccatcagtttaaggttggctgttggcaacggatat
ggtctggttcgtctctatgacctcaaaggctgttcagatgggacacacttccactttgtc
acagaaactaaaaatgaagttcacattttgcctcaaggaaaaggacctcaatgtagagcc
attttttgccttcttaattccccaatacaagcactacagtttgcaaattgtggagctaaa
cttgctgtgggatttgaatctggtcgtgttgcagtgcttgacacaagttcatcattgctt
ttgttctggatagatggtgtgtcttgctctagctttccaataatttcaattacttggaaa
gaacttacatatactcatagccttgtcaaaagccctaagcactctgaaacaaaagtccca
gcctactcttcagaggaagtaatatttgtattaaccaaggatgcaaggattaatttgttt
gaaggtggtactggtaaaattataggcactcagccatggcacttgaaaaagccatcagtt
gcaatttcaatgtatgttatagctgtcagtatctctgtctctgaatcatcaaatgagcag
ccggagtcccatgaggatagtgctaccaagaaagaacctgtgtccaatagtaccacagtt
agcataaattcgcatgaaggtgtacaacagccttcttcagaaactgcatgttctgaggaa
agattgttggattcaattcttttgctttgttgtgaggattcattgcgcttgtactctacg
aaatctgtgattcagggaaacaataaatccattcgtaaagtgaaacatgcaaaaccttgc
tgttggacagcaactttaaggaaagatgaaaaagtttgcggactggtcctgctgtttcag
acaggtgtaattgaaatcagatccttgccagatttagaattggtgaaagaaagctcctta
gtgtcaattttgaggtggaattttaaggcaaacatggacaagacgatgagctcttctgat
aatgggcagattacactggcaagtgggtgtgaattggcgttcatctctttattagctggt
gaaaatgatttcaggattccagaaactttgcctcgtctccatgatgaagttcttgcagct
gctgcagatgctgcccttagtttctctttaaatccaaagaataagcagggtaccaaacct
ggcattctaggtggtatcatcaaaggttttaaagggagaaaagttccccatactgaagat
cttattctaaatcctaaagtaaatttttctcatttagagggcatatttttgaagtcccca
ttctcagactcgtctccagctgttacggataatcaggaagctgaggagcttaatatagat
gacattgagatagatgagcctctaccagtggcgtcatcttcatcttatgattttcaaaat
ataaagacagagaaggggacagagagggaaagattatttcaaggggggactgatgatacc
aaacccagacttagaacaccggaagaaatcatagctacatatagaaaagctggggacgct
tcttctgtggctgcacatgcaagagacaagcttgtacagaggcaggaaaaattggagaaa
attagcaggcgcactgaagagctgcaaagtggagctgaagactttgcatcattagcaaat
gagcttgtgaagaccctagaggctcgaaaaaaatggtggcatatatga
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