Castanea sativa (European chestnut): 142611128
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Entry
142611128 CDS
T11266
Name
(RefSeq) putative E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142611128
04121 Ubiquitin system [BR:
csaa04121
]
142611128
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142611128
Membrane trafficking [BR:
csaa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
142611128
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142611128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-C3H2C3
DUF1272
DUF5318
VPS18_RING_C
Rad50_zn_hook
Zn_ribbon_8
zf-Nse
Prok-RING_4
zf-RING_16
zf-FPG_IleRS
zf_RING_Vps8
DUF7129
Motif
Other DBs
NCBI-GeneID:
142611128
NCBI-ProteinID:
XP_075639281
LinkDB
All DBs
Position
9:complement(19734738..19736837)
Genome browser
AA seq
369 aa
AA seq
DB search
MASTASSYWCYRCNHFIRVRVRVEDAVLCPDCGGGFVEETPTRSPLHRFPAAMYIDNPPN
PEHNAIPIPRLRRSRRNGGDRSPFNPVIVLRGNEPERGNFELYYDDGAGSGLRPLPASMS
EFLMGSGFDRLLEQLAQLEINGVGRLEHPPASKAAIESMPFVKIVGSHVSMESHCAICKE
PFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPTDVRGGSSPELGPVTGSARD
EETVGLTIWRLPGGGFAVGRFTGGIRAAERELPVVYTEVDGGFNDGGFNGGGAVPRRIAW
ETSMRSSRESGGLRRVFRSFFSFFGRLRITSSTSSSRSEPQRSRSNLVFSRSWRRRQRGQ
PAALDDDRW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactgcctcgtcctactggtgctacaggtgcaaccacttcatccgggtccgg
gttcgggtcgaagacgccgtcctctgccccgattgcggcggcggattcgtcgaagaaacc
ccgacccgatccccgctccaccggttccccgccgcaatgtacatcgacaacccgcccaat
ccggagcacaacgcaatcccaatccctaggctccgccgcagccggaggaacggtggggat
cgctcgccgttcaatccggtcatcgtcctccgtgggaacgagcccgagagagggaatttc
gagctctactacgatgatggagcggggtcggggcttcggcctttaccggctagtatgtcg
gagttcttgatggggtcagggtttgatcggcttctcgagcaattggcgcaattggaaatc
aatggggttggaaggttagagcatccaccggcctcaaaagctgcgatcgaatcgatgccg
tttgtgaagatcgttgggagccatgtctccatggagtctcattgcgcaatttgcaaagaa
ccgtttgagctggattcggaggcgagagagatgccttgtaagcacatttaccattcggat
tgtattctgccatggctttcgattaggaattcgtgcccggtgtgtcggcacgagttgccc
acggatgtgcgtggtgggagttcgcctgagttgggccctgtaacaggttcggctcgggat
gaagagactgtgggattgacgatttggagattgcccggtggcgggtttgcggttgggagg
tttactggggggataagagcagcagagcgtgagctgcctgttgtttacactgaggtggat
ggtgggtttaatgatggagggtttaatggtggtggtgctgttccaaggaggattgcgtgg
gagacaagtatgagaagctcaagggagagtggcgggttgcgccgcgtgtttcgtagtttc
ttctcattctttgggaggcttagaattacttcatcaacctcaagctcaaggtctgagccg
caaaggagtcgctctaatttagtgtttagtcgatcatggaggaggcggcagcgtggccag
ccagcggctttggatgatgacagatggtaa
DBGET
integrated database retrieval system
