Castanea sativa (European chestnut): 142611209
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Entry
142611209 CDS
T11266
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142611209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142611209
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142611209
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
142611209
NCBI-ProteinID:
XP_075639372
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Position
9:complement(4838986..4844082)
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AA seq
709 aa
AA seq
DB search
MATGRSRSVRFRDDLETANCTPPNDSHLLMPTHNINDSQAPDMCLKSTKKDAIGKYSIGR
ELSNVFSEDYNVVEKIILDPRGPVLNRWNKIFLLACLLSLFVDPLFFYLPVAKEERCIEV
MGSLEVGLTIIRSMIDAFYVVQIFVRFRTAYVAPSSRVFGRGELVIDPSKIASRYLHKSF
WLDLVTALPLPQILIWAAIPNLRGSEITPRSIVLRFLIIFQYLLRLYHIYPLTSEIVKAN
GVMMETAWAGAVYNLMLCMLASHILGSCWYLLSIQRQEECWMKVCSLEKHDCKYWFLYCS
NVDKPIRATWFKSSNISSLCDGTSDFFQFGIYGEALTSGITASRFFNKYYFCLWWGLRNL
SNLGQNLVRSANIGEMTFAFVIVILGLVLFALLIGNMEMYLQSTTMRLEEWRARRTDTEQ
WMHHRQLPRDLKQRVRRYDQYRWVATQGVDEEAILKDLPMDLRREIKRHLCLDLVRKVPL
FDQMDDRMQDAICERLKPCLSTPGTCLIHEGDPVNEMLFIVRGYLDSCTTNGGRTGFFNS
CSIGAGDFCGEELLTWALDPRPNVVLPSSTRTVKAVTEVEAFALIAEDLKFVAAQFRTLH
SKKLRQTLRFHSHQWRTWAACFIQAAWFRYKRLKEAAELKKRESLVASVPKSALEESSSF
PPYGSSFTTYAAKLAASTGRGGSKRCGTQFDILNSLQKPVEPDFTVEDR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctaccggtagatcaagatcagtgagatttcgagatgatcttgaaactgcaaactgc
acaccacccaatgatagtcatttgttaatgccaactcataacatcaatgattcacaggca
cctgatatgtgcctgaagagtactaagaaagatgcaataggcaagtactctatcggaaga
gagctttccaatgtcttctctgaggattataatgtggtggagaagataatattggatcct
cggggacctgttttaaacagatggaacaaaatcttcttgttggcatgtttgctttctctt
ttcgtggaccccttgtttttttacttaccagtggctaaggaagagaggtgcattgaagtt
atggggtccctagaagtaggccttactatcattcggtcaatgattgatgcattttacgtt
gttcagatttttgttagatttcgaacggcttatgttgctccttcctctcgagtatttggg
agaggagagcttgttattgacccttcaaagattgcttcaagataccttcacaaaagcttt
tggctagaccttgtgactgccctaccccttccacagatattgatttgggctgctatccca
aatttaagaggttcagaaattacccctagaagtattgttcttcgcttccttatcattttc
cagtacctcctgagattatatcatatctatccgctcacatctgaaattgtcaaggccaat
ggggttatgatggaaacagcatgggctggagctgtatacaatctgatgctctgtatgctg
gcaagtcatattttaggatcctgttggtacctcttatccattcaacgacaagaagaatgt
tggatgaaagtttgcagtcttgaaaaacatgattgcaaatattggtttttatattgcagt
aatgtagataaacctataagagctacttggttcaaatccagcaatatctcaagtctatgt
gatggaactagtgacttctttcagtttggcatttatggtgaggcactgacttctggaatt
acagcctcaaggttcttcaataagtactacttctgtctttggtggggcctgaggaatctg
agcaatttgggacagaatctcgtcagaagcgctaatattggagaaatgacttttgctttt
gtcattgtgatccttggattggtgctttttgcactgcttatagggaatatggagatgtac
ctccaatccacgactatgagactggaagagtggagagctaggaggactgatacagaacaa
tggatgcatcacaggcaactaccacgtgacttgaagcagcgtgtgcgaaggtatgatcaa
tacagatgggttgcaactcagggagttgatgaggaagccattcttaaagatctccccatg
gatctcagacgagaaatcaaacgccacctgtgtttagatctagttcggaaagtaccactt
tttgatcaaatggatgacaggatgcaggatgccatctgtgaaaggctgaaaccttgccta
agtacacctggcacatgcctaattcacgagggtgatcctgtcaatgagatgcttttcatt
gtacgaggctacttagactcttgcaccaccaatggtggtcgcactggtttcttcaattca
tgcagcattggagcaggggacttctgtggtgaagaattgctaacctgggccctggaccct
cgtccaaatgttgtgcttccttcatctacacgcacagtaaaagccgtcaccgaagttgaa
gcttttgctctcattgctgaggacttgaagtttgtagcagcccaatttcgcactctgcac
agcaagaaactcaggcagacacttaggtttcactctcaccaatggaggacatgggctgcc
tgttttatacaagcagcttggtttcgatataaaagactgaaagaagcagctgagctcaag
aagagggagagtctggtggcatctgtgcctaaatctgcactagaagagagttcatccttt
cctccatacggctcaagctttactacgtatgcggcaaaattggcggcaagcactgggaga
ggtggaagcaagaggtgtggaactcaatttgacattctaaactcattacagaagccagtt
gaacctgattttactgttgaagatagatga
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