Castanea sativa (European chestnut): 142611245
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Entry
142611245 CDS
T11266
Name
(RefSeq) zinc finger protein JACKDAW-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142611245
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142611245
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
142611245
NCBI-ProteinID:
XP_075639419
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Position
9:4184361..4187172
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AA seq
531 aa
AA seq
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MMSGDSFSVASSIGGFAQEVQNTNPNPNPAAKKKRNLPGTPDPDAEVIALSPKTLMATNR
FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVRKKVYICPEKTCVHHDPSRALGD
LTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFIT
HRAFCDALADESARLSSLAATNNLNFGNDSMNETVINPQPGLPLVASQFGSGFRPELSGM
AINGNSLGVDQQKPRLSLWLNQANSQLNPTDMMANSHLYASSSSTAFPEMVQAVSGNLFG
SSSMPNFGNFNNQQFQGFDKSVSTSTNASLSLTALPHEMKEEGNKGNLVETLSSLYPDTQ
KKQSKPSMPMSATALLQKAAQMGSTTSNPSSIFGNSFGVMNSSSSNTTTSFNTLNQNRND
LHQVLQNSKQQAAENFTASGSVDGMMGSSNLSSLTTSTNSFDQLMMQTSGKQSDPVALKN
HPGSNAIENSLTRDFLGMGGRESQRPFLAQELAKFASMSSAMGLSQFTGNH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccggtgactctttttcagttgcctcttcaattggagggtttgctcaagaagta
cagaatacaaaccctaaccctaatccagctgccaagaagaagagaaatctaccaggaaca
ccagatccagatgctgaggttattgctctttcacccaagactctcatggcgacaaaccga
ttcgtctgtgaaatatgcaataaagggttccaaagagatcagaatctacagcttcatcga
aggggtcacaatcttccatggaagctaaggcaaaggaccaacaaagaggtccgaaaaaag
gtctatatttgtccagaaaagacttgtgtccaccatgacccgtccagagctctcggagac
ctcactgggataaagaaacattttagcaggaaacacggcgagaagaaatggaagtgcgag
aagtgttcaaagaaatacgcagtccaatctgactggaaagctcattctaagacttgtgga
actcgagagtacaagtgtgactgtggaacccttttttccaggaaagatagcttcattacc
cacagagccttttgtgatgctttagctgatgagagtgctaggctcagttcgcttgcagcc
actaataatctgaatttcggaaatgattcaatgaatgagactgtgattaatcctcaacct
ggtttgccacttgtagcttcccaatttggctcaggttttcgaccagagcttagtggcatg
gctattaatggtaactctcttggtgtagatcagcaaaagcccagattgtcattatggctt
aaccaggcaaattctcagcttaatcccactgacatgatggctaattctcatctctacgca
tcatcaagttctacagcttttcctgaaatggtgcaagcggtgtctggtaatctctttggt
tcatcttctatgcctaattttggaaactttaataatcagcagtttcaagggtttgataag
agtgtttcaacctcaacaaatgcaagtctgtctttaacagcactacctcacgaaatgaaa
gaggaagggaacaaaggaaatctggttgaaaccctatcctctctttaccctgatacccag
aagaagcagtcaaagccatctatgccaatgtctgccactgcacttttgcaaaaggcagct
cagatgggttctacaacaagcaacccatcatcaatctttggcaatagcttcggagtcatg
aactcttcttcttcaaacacaacaacaagcttcaacactctcaatcaaaaccgaaatgat
ctgcaccaagtccttcaaaattcaaagcagcaagcagctgagaatttcacagccagtggg
agtgttgatggaatgatgggaagttcaaatttaagttcattaacaacttcaacaaacagt
tttgatcagcttatgatgcaaacaagtggaaagcaaagtgacccagttgcattaaagaac
catccaggttccaatgcaattgaaaatagtctaactagggattttcttggcatgggaggg
agagaatcacaaaggccttttttagcacaggaattagctaagtttgcttcaatgagttca
gctatgggtttgagccaattcactgggaaccactga
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