Castanea sativa (European chestnut): 142611582
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Entry
142611582 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142611582 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142611582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142611582
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
142611582
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142611582
NCBI-ProteinID:
XP_075639769
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Position
10:23079626..23087935
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AA seq
794 aa
AA seq
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MPRKVNYGVDYDEEADDYENYDYDYDYDYDDDVEDNGKAPQSEQETSKRGLWRCSVCTYD
NDEGLSACDICGVLNPSKTGTNIDKQTVKGMCQNSGASKMAKSLFASLPQRIPKKAVSLQ
KQNDVFVKEEGNNSHKHMNIQGQFHEFHKAFSTHSHHRVNIAPFKFDVPSPDDLVSNGLR
SSKMGSKANFNDMKSSRVSSGITGKNGLLNIKSNSERSDVSSSLMPKGKQDIDDNNCSKN
KAHNVQSSLKISDGSCATMPKGRHHNVDEGSCSKNDMANILSSDKSSHSSPAWNLKGRHE
ITGDSSSSLISGGKPQSLKSSLNKMALGEGSGLSNNVNARGTRSQSEYKPEKWMLNDQAE
DTLIQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDE
SAEERERGITMTVAVAYFDSKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGA
FEAGMDSAKGQTREHAQLIRSFGVDQIIVAINKMDVVDYSKERFDLIKQQLGTFLRSCGF
RDPSITWIPLSAMENQNLVVASSDVRLLSWYYGPYLLDAIDSLQPPTRDLSKPLLMPICD
VIKLPSLGQVSACGKVEAGALRSGSKVLVMPSGAVGSVRSLERDSQACTSARAGDNVAVS
LQGIDAGNVMAGGVLCHPDFPVAVAKRLELKVLVLDITTPILFGSQLEFHIHHAKEAGRV
AKILSLLDPKTGKVTKKTPRCLIAKQSAVVEVALQGPVCVDEFSNCKALGRVFLRASGRT
IAVGIVTRIIESQD
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaaactatggagttgattatgatgaagaagctgatgactatgaaaat
tatgattatgattatgattatgattacgatgacgacgtagaagacaatgggaaagcacct
cagtcagagcaagaaacttctaagcgtggcctttggcgttgttctgtatgcacttatgat
aatgatgagggtctgtctgcttgtgatatttgtggggtgctaaatccttcaaaaactggc
accaatattgacaagcaaacagttaagggcatgtgccaaaattctggagcatccaaaatg
gccaagtctctttttgcatcattgccgcaacggatacccaaaaaggctgtatcattacaa
aagcagaatgatgtttttgtgaaggaagagggcaataactcccacaagcatatgaatatc
caaggacaatttcatgaattccataaggcttttagtactcatagccatcaccgtgttaat
atagcccctttcaagtttgacgttccatccccagatgatttggtttctaatggactacgc
tcctctaaaatgggttcaaaagccaactttaatgacatgaaatcttcaagagtttcctca
ggcatcactgggaagaatggtctacttaatataaaatcaaattctgaaaggtcagatgtg
tcatcatcattgatgccgaaaggcaaacaagatattgatgacaacaattgttcaaagaac
aaggctcacaatgtacagtcaagtctaaaaatttcggatggctcatgtgcaactatgcca
aaaggcagacatcataatgtggacgagggcagttgttcaaagaatgatatggccaacata
ctttcaagtgataaaagctctcatagctctcctgcatggaatctgaaaggcagacatgaa
attacaggtgatagcagtagttctttgattagtgggggcaagccacaaagccttaaaagt
agtttgaacaaaatggctcttggtgagggatctggattatcgaataatgttaacgctaga
gggactcgttcacaatcagagtataaacctgaaaagtggatgctcaatgaccaagctgaa
gatacattgattcaactgaatcttgcgattgtaggtcatgttgattctggaaaatcaaca
ctctctggtagactgctacatcttttggggcgaatatcccaaaaagagatgcacaaatat
gaaaaggaggcaaagttacagggcaaggggtcctttgcttatgcttgggcattggatgag
agcgctgaagaaagggaaaggggaataaccatgacggttgctgttgcttattttgattcc
aaaaaatatcatgttgttgtgcttgactcaccaggccataaggattttgttccaaacatg
atatccggggcaacacaagctgatgctgcaattcttgtgatagatgcctcagtcggtgca
tttgaagctggtatggacagtgccaagggacaaacacgggaacatgcacaacttatcaga
agttttggtgttgatcaaattatagttgcaattaacaaaatggatgttgtggattactca
aaggaacggtttgatttaattaaacagcaacttggtacatttctccgttcttgtggtttt
agagatccgtctataacgtggatcccattgagtgccatggaaaatcaaaatttggtggtg
gcttcttctgatgttcgtctgttgtcctggtattacggaccttatctgttggatgcaata
gattccctccaacctcccacaagagacttgtcaaagcctctgcttatgcctatatgtgat
gttattaaattgccttcactagggcaggtgtctgcctgtggtaaagtagaagctggagcc
cttcggagtggatccaaggttctagttatgccatcaggggctgtggggtcagtacgttcc
ttagaacgtgactctcaggcttgtacttctgcaagagctggagacaatgtggctgttagt
ctgcaaggcattgatgcagggaatgtgatggctgggggtgtgctatgtcacccagatttt
cctgttgctgtcgcaaaacgtttggaactgaaggtccttgtcttggatattacaacccca
attttatttggttcacagttggaatttcatatacaccatgcaaaggaagcaggaagagtg
gccaaaatattgtctttgcttgatcctaagactggcaaggtgacaaagaagacaccgcgc
tgtcttatcgcaaagcagagtgcagttgttgaggtagctttgcagggaccagtgtgtgtg
gatgagttttcaaattgtaaagctctagggagggtgtttttgagagcatcaggaagaact
attgctgttgggattgtaacccgaataattgagtctcaggattag
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