Castanea sativa (European chestnut): 142611694
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Entry
142611694 CDS
T11266
Name
(RefSeq) protein SLOW WALKER 1-like
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142611694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csaa03009
]
142611694
Ribosome biogenesis [BR:
csaa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
142611694
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Utp13
Motif
Other DBs
NCBI-GeneID:
142611694
NCBI-ProteinID:
XP_075639912
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Position
10:complement(21728963..21734759)
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AA seq
524 aa
AA seq
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MAEPNSTFKPIKPKLKPKPRTPKQTPESKYWSSFKTHQIPDLISSITSLTFSPSPPHPFA
ATHSTSLKIFNPQTLSPSSTISSFSDVVSSASFRCDGLLIAASDLSGLIQVFDVKTRTPL
RKLRSHTRPVRFLKYPLHDKLHLVSGGDDAVVKYWDVASETPLLELLGHKDYVRCGDFSP
VSHEMCVTGSYDHTVKLWDVRVTGSKTVMEVNHGKPVESVVFLPSGGLVATAGGNSVKIW
DFIGGGKMVYSMESHTKTVTSVCVGRVGKENVEEGREHRVLSVGLDGYMKVFDYGRMKVT
HSMRFPAPLMSIGFSPDCGVRVIGSSNGVMYVGKRKTKEENVESGLRSFWSLGVEEERRV
MRPSYFRYFHRGQGDKPKEGDYLVMRPKKVKLAEHDKLLKKFRHKEALVSVLGNKNPENV
VAVMEELVARRKLLKCVENLDNEELGLLLMFLQKYSTVPRFSGLLMGLTKKVLEMRVEDI
RGSEALKGQIRNLKRSVEEEIRIQHSLQELQGIISPLLRIAGRG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccaaattcaaccttcaaacccatcaaaccgaagctcaaacccaaacccaga
accccaaaacaaaccccagaatcaaagtactggtcctccttcaaaacccaccaaatccca
gacctcatctcctccatcacttccctcactttctctccttcgcctcctcaccccttcgcc
gctactcactccacttcactcaaaatcttcaatccccaaaccctctctccttcctccacc
atctcctccttctccgacgtcgtttcctccgcctcgttccgctgtgacggcctcttgatc
gccgcgtctgacctctccggtctaatccaagtgttcgatgtcaaaacgcggaccccactt
cgtaaactcaggtcccacacacgcccagtccgttttctcaaatacccacttcatgataag
ctccatttggtctctggtggcgatgatgctgttgttaagtactgggatgttgcttctgag
actccacttttagagcttttgggtcataaggactatgtgcgttgtggtgatttttcacct
gttagtcatgaaatgtgtgtcactgggtcttatgatcatacggttaagctttgggatgtg
agagtgactggttcgaaaactgttatggaggttaaccatggaaaaccagttgaaagtgtg
gtttttttgccatccggggggttagttgctactgcaggtgggaattcggttaagatctgg
gattttattggaggtgggaagatggtttattcgatggagagtcataccaagacggttact
tcagtttgtgtagggagagttgggaaggagaatgttgaggaagggagggagcatagggtt
ttgagtgtgggattggatgggtatatgaaggtgtttgattatgggaggatgaaggtcaca
cattctatgaggttccctgcaccacttatgtcaattgggttttcaccagattgtggggtg
agagtgattgggagttcgaatggggtaatgtatgttgggaagagaaaaacgaaggaggag
aatgtggagagtggtttgagaagcttttggagtttaggtgtggaagaggagagaagggtt
atgaggccttcatattttcggtactttcatagagggcagggtgataagcctaaggagggg
gattatttggttatgaggccaaagaaggtaaagttggcagagcatgataagttgttgaag
aagtttaggcacaaggaggcactggtgtcagtgttgggcaataagaatccggagaatgtg
gtggcggtgatggaggaattggtggcaaggaggaaattgttgaagtgtgttgagaatctg
gataatgaggagcttgggttgctgttgatgttcttacaaaagtattctacagtgccaaga
ttctcaggtttgttgatgggattgacaaagaaggttcttgaaatgcgggttgaagatatc
agaggttctgaggccttgaagggtcaaattagaaatcttaagcggtctgttgaggaggag
atacggatacaacattctttgcaagagctacagggtatcatttctcccttattgaggatt
gctggaaggggatga
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