Castanea sativa (European chestnut): 142611795
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Entry
142611795 CDS
T11266
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142611795
Enzymes [BR:
csaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
142611795
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
142611795
Prokaryotic type
142611795
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
RNF216_N
Motif
Other DBs
NCBI-GeneID:
142611795
NCBI-ProteinID:
XP_075640054
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All DBs
Position
10:complement(12887968..12892330)
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AA seq
498 aa
AA seq
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MASVSSPTNKLSSSVQPPGRMRVLKERSGPSEDGPVVYWMFRDQRIRDNWALIHAVDEAN
RAGVPVAVAFNLFDQFLGAKARQLGFMLRGLKQLQLDLQESLQIPFFLFQGEAEETIPDF
LRECRASLLVTDFSPLRKVQRCKEEICKRVSDLVTIHEVDTHNVVPTWVASEKLEYSART
LRGKINKMLPEYLIDFPTLQTPSRKWAATSRLIDWDDLIADVLRKGAEVPEIEWCEPGEK
AAMEVLMGSKNGFLTKRLKGYSADRNNPLKPKGLSGLSPYLHFGQISAQRCALEARRVRK
LFPQAVDTFLEELIVRRELADNFCFYQHHYDSLQGAWEWARKTLMDHASDEREHIYTREQ
LEKAKTADPLWNASQLEMVYYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNDKYEID
GRDPSGYVGCMWSICGIHDQGWRERPIFGKIRYMNYAGCKRKFDVDGYISYVKRLVGEIK
KRKSESLLSQKAKELRSS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtttcttctccgacgaacaagttatcgtcgtccgtacagccaccgggacga
atgagggttttgaaggagcgatctggaccgtcggaggatggtcccgttgtgtactggatg
ttcagggatcaacggatcagagacaactgggctttgatccacgccgttgatgaggccaac
agggccggtgtacccgtggccgtggcgttcaatctcttcgaccagtttcttggcgcgaaa
gctcggcagctagggtttatgttgcggggtttgaagcagttgcagctcgatctccaagag
agtcttcaaatccctttctttttgtttcagggagaagctgaagagactataccagacttt
ttgagagaatgcagggcttcacttttagttacagacttctcacctttacgcaaagttcaa
agatgtaaagaggaaatttgcaagagagtgagtgatttggtgaccatacacgaggttgat
acccacaatgtagtacctacatgggtggcatcagagaagttggagtatagcgctaggacc
ttaaggggaaagataaacaaaatgcttcctgagtacctcattgattttcctacattgcaa
actccaagtagaaaatgggctgccacaagtcggttgattgattgggatgacctcattgct
gatgttttgaggaaaggagcagaagttcctgaaattgagtggtgtgaaccaggggagaag
gcagcaatggaagtgttgatggggagtaaaaatgggttcttgacgaaaaggttgaaaggt
tattcagcagataggaataacccattaaaacctaaagggctttctggtctctctccatac
ttgcactttgggcaaatatctgcgcagcggtgtgctttggaggctcgtagggtcaggaaa
ctttttcctcaggcagttgatacattcttggaggagttgattgtgcgtagagaacttgcc
gataacttctgcttctaccagcatcattatgattcactgcaaggagcatgggaatgggca
cgtaagaccttgatggaccatgcttctgatgagcgagaacatatttacaccagggagcaa
ttggaaaaggcaaaaacagccgatcctctctggaatgcttctcagttggagatggtttac
tatggcaagatgcacggttttatgcggatgtattgggccaaaaagattcttgagtggaca
agaggaccggaagaagcacttgaaatatcaatatatctgaatgacaagtatgaaatagat
ggcagggacccaagtggatacgttggttgcatgtggtcaatatgcggcattcatgaccag
ggctggcgggagcgaccaatttttgggaaaatacgttacatgaattacgcaggctgcaaa
aggaaatttgatgttgatggatacatttcttacgttaaaaggctagtgggtgagattaag
aaaagaaaatcagaaagcctgctcagtcagaaggcaaaggaacttcgcagttcataa
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