Castanea sativa (European chestnut): 142612267
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Entry
142612267 CDS
T11266
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142612267
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csaa01009
]
142612267
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142612267
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142612267
03041 Spliceosome [BR:
csaa03041
]
142612267
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
142612267
Protein phosphatases and associated proteins [BR:
csaa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
142612267
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
142612267
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
142612267
Spliceosome [BR:
csaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142612267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
142612267
NCBI-ProteinID:
XP_075640497
LinkDB
All DBs
Position
1:32309640..32316337
Genome browser
AA seq
321 aa
AA seq
DB search
MDEAVLDDIIRRLTGAKVGRTTKQVQLTESEIRQLCVSSKDIFLSQPNLLELEAPIKICG
DVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYRENFFLLRG
NHECASINRIYGFYDECKRRFNVRIWKVFTDCFNCLPVAALIDEKILCMHGGLSPELKNL
DQIRNIARPVDVPDQGLLCDLLWADPDKEVEGWAENDRGVSYTFGADKVAEFLRKHDLDL
ICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSEKKG
KVGFGNNMLRPGTPPHKGGKG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggcggtgcttgacgatataatacggcgactgacgggtgcgaaagtcggtcgc
accacgaagcaggtgcagctaacggagtcggaaatcaggcagctttgtgtttcttcaaag
gatatctttctcagccaacctaatcttcttgagcttgaggctcccatcaagatttgtgga
gatgttcatggtcagttctctgatcttttacgattgttcgagtacggtgggtacccacct
gaagcaaattatttattcctaggtgactatgttgatcgtggtaagcagagcatagagaca
atttgccttctccttgcatacaagatcaaatacagagagaacttctttcttctcaggggc
aaccatgaatgcgcatccatcaatcgtatatatgggttctatgatgagtgcaagcggagg
tttaatgttcgtatctggaaagtatttactgactgctttaactgtctgcctgttgccgct
cttatagacgagaagatcctttgcatgcatggtggattgtctcctgaattgaaaaacttg
gatcagataaggaatattgctcgccctgttgatgtgccagatcagggccttctctgtgat
ctattgtgggctgatcctgataaagaggttgaaggctgggcagagaacgaccgtggtgtt
tcatatacatttggggctgacaaggttgctgaattccttcggaaacatgatcttgacctc
atctgccgagctcaccaggttgtggaagatggatatgagttttttgcaaagcggcagctg
gtaaccatattttcagcaccaaattattgtggcgagtttgataatgctggtgcaatgatg
agcgtggatgatacattgacgtgttccttccagattcttaaatcttccgagaagaaagga
aaggttggatttggcaacaacatgttgagaccaggaactccacctcataagggtgggaag
ggttga
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integrated database retrieval system
