Castanea sativa (European chestnut): 142612595
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Entry
142612595 CDS
T11266
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC142612595
Organism
csaa Castanea sativa (European chestnut)
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Gene cluster
GFIT
Motif
Pfam:
SPOC
CUE
RRM_1
API5
Motif
Other DBs
NCBI-GeneID:
142612595
NCBI-ProteinID:
XP_075640815
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All DBs
Position
10:34637942..34661017
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AA seq
2187 aa
AA seq
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MASAEQPPKKRKLYEPLSEPPLPSSPPPPPPPPSEPPSQPPPPPQSLPQHEESAVAPPST
PPPLSQEEILIRRRNRDEIRSVHECYKRIRFCLSHNDSAASMPDLEQAYLSLITASRGCS
SVQRIVAELIPRYASHCPTALEAAAKVVINMHNWTLAVINRGEDADGVAFLTAKACIFGL
VDICCTASSEAPTSSVIRGICFAVFQNVLSFFVSSFEGKDIFHIVDKEILKMQDSADVFA
ELKQKFSDEDVSSLIKLSKFRVLSLLRIFFRCPKNLLAASFEFFNISLAEGVNKEGQYFL
SLVTSKLVEDVAPVLGKTSDGSKTGSIDKSTGSNEELVSDGNRVSVDASSPVPKSCLLAM
VLEKDRSLQRWIFSKYKKLTNVSLSNTISDIMSDMKRIIQSYEEVMSVADSLVDSDADES
DPTKYINQQYLVPRISNQREHSSDLSGSAHDIGGLRSMDFESGEHGDLSHGRSSRDLMNH
QRLSPRRTPSDFRSNSFEGRNNFFHVEKNQVSNMEFNLSTMRSSNGGLHNSMASPKHNLA
IPCTTTTTQIVWYSDGEPAAMDIVSASKQLWVGFSGSDASEAQLRFQFERFGPIEQFFFF
PMKGFSLIEYRNIMDAIKARDYMRRHFPWHVKFMDVGLGTRGSMKGVAVGSSSHVYVGNV
SSQWAKDEILHESRKVHHYKGPYMVTELSNEGAVLMEFEAPEEAASVMAHLRQHRMERSN
YRAPPANVAVPINNLGNMSSSSIGSPHTRTIPGSPADSCRKRMSHLSSLLSSLRAKYNIN
QSSSYFDSYISGNSHTAMMREEDKVSSSTLRINFPNISSPFLTDDELMTICSLAVGNVGS
VVRLTRANMQMGCGWFVECSSIDAAITVLKNLRGCPGVFFQIEFSQPGKHHPAPFPVKHE
SSSRELVSPRMKPDNHINTAQGGYSFQSNWAVSGSTEMPEIGARKVDGYDNKAVIDPSQG
GSHVVSGTAEQMWTYKKPEVELHSAPGNIPCMPLSTRGPPIPPPQQIHSSPFMRPAYLPP
NSPWDARGLNHHMPLNPVSPGVMPNNFHGNAPFIPASVTPLAQIQGTPLQHFDQMFSLPV
VPPPLMSLPPPQPEMPPPLPPSPPPLPQSQPPPPPPPPPPSSPPPPPPPPVSETSNMESS
GQCPEYQWQGTLSKSGVHYCTVYANKLDSDICKYSNPTSEPAEWPAKLDMSKRTDFRHVK
STFTSTPPHKREVCQLLPSSAGDHKGFQDFISYLKQRECAGVIKIPAAKSIWARLLFILP
YSHDACSMLSIAPNPSDCLIALVLPKETNLEWAXVXQVGSLEWIPKKMSNRYANDNRQDG
NKGFTKTTQKKFVPKNHNSAPKEPNPNPTLSSSLRQSLSKQPDAAAAAASKTTSRENREL
VSGRAASGNFVNYLPQDEAVAAGLGPNEAGSDALLSQSVVDLLNRELSRLLKLNPRDFWR
EVARDSSLHEFLDSFLQFRSRWYDFPHRGAKGILAGVIVGELELSRRVFMVLYRISSNRD
PGARAADCLSPKDHGVILQEKKLLDLPKLLDICAIYGHENEDLTRILVGNALKAQPRIHD
NLTAVMSHFLSIVHTMNQRCSSSLEVLFSSGSSEDHGTSRLHADYLEVMDFINDAIVSMD
AFVTAYKPAAVYFACPAELSLGNVELLNTLARLHDSLLPSLQRGFRIIFKADEIEIISKV
AISLKMLSMRIVKFGWNLLDICYLSSEVFGDSFPVPPATKMFPANVEDSFIRADILVQTL
REINGISLQFQENQNQETFLQNVENVHNVMSKLESLQNTGWIFMEDEQFQYLSGIMHSPK
ATTKEPSSTRTPITSNKAQVDEDAAVMESKISQIKDLFPDYGKGFLAACLEVYNQNPEDV
IQRILEGTLHEDLKSLDSSLETIPMPKSASTAKLKDKGKGKLEEPASPKRKIESTTPSST
SSVSVTREPPVEGPSFSSSYNLGRYVRKSQMDLPDSNILDSKTETDSTRAAAIVSQYEYE
DEYDDSFDDLGLSIGETGGEENEILGDKMRSNSGKSWGQEIENSAQNAPSSKWGSKKKPQ
YYVKDGKNYSYKVAGSVAVANSMEASLISQAQQESIYGLGRGGNFPLGAMKKLTESYEEQ
DNQLDVPQAEGRGNVGNMRGRGRRGGGGRPRESHEEQDKQQPDASETEVRGNLGNFRGRG
RRGGGGRSNNYRKDRAMNKHFSGLTGI
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggagcagcctccgaagaagcgaaagctatacgagcccttatcagaaccg
cctcttccttcttctcctccaccaccaccaccaccaccatcggagccaccttcacaacca
cctccaccaccacaatccctaccccagcacgaggagagcgccgttgctccaccgtcaaca
ccacccccgctctctcaggaggaaattctcatcagaaggagaaacagagacgaaattcga
agcgttcacgaatgctataagcgtattaggttttgcctttcacacaatgactctgctgct
tccatgcccgacctcgaacaggcctatctttccctcatcaccgcttccagaggttgttct
agtgtacaacgtatagtggcggaactcatccctcgatatgcatcacattgtccaactgct
cttgaagcagcggcgaaagttgttatcaacatgcataactggactttggcagtgataaat
agaggagaggatgctgatggggttgcatttttgactgctaaagcctgtatctttggtcta
gttgatatttgttgcaccgcatcttcagaggcaccaacatcgtctgtcattcgaggcatt
tgctttgcggtttttcagaacgtgctttctttctttgtatcatcgtttgagggaaaggat
atctttcacattgttgacaaggaaattttgaagatgcaagattctgcggatgtctttgct
gagcttaagcaaaagttctcagatgaagatgtatcttcattgattaagctatccaaattc
cgtgtgttaagtttgctccgtattttctttcgttgccctaaaaacttgcttgctgcatct
tttgaattctttaacatcagtttagcagagggagttaataaagagggtcaatattttcta
agtctggtgacaagcaagcttgttgaagacgtggctcctgtgttgggtaaaactagtgat
ggatctaaaactggttctattgacaaaagcaccggaagcaatgaggagctagtatcagat
ggcaaccgtgtttcggtggatgcatcatctcctgtgccaaagagctgcttgttggctatg
gttcttgaaaaagaccgatcattgcagagatggattttctcaaagtacaagaaattaact
aatgtatcgctttccaatactatatcagatattatgtcagatatgaagaggatcattcaa
tcatatgaagaagtaatgtctgtagcagacagtctggtagatagtgatgcggatgaatct
gatccaactaagtacatcaatcaacaatatttggtgcctaggatctctaatcaacgtgag
cactccagcgatctatctggttctgctcatgatattgggggcttgaggtccatggatttt
gagtctggtgagcatggagatttgtcacatggcaggtcttccagggacctaatgaaccac
cagaggctttcacccagaagaacgccatcagacttcaggagtaattcatttgaaggtaga
aataacttttttcatgtcgagaagaatcaggtttcaaatatggaattcaatttatctacc
atgagatcctccaatggaggcctacataattctatggcatctcctaaacataacttggca
ataccatgtactaccacaacaactcaaattgtttggtactctgatggagaaccggcagcc
atggatattgtctctgcttccaaacagctctgggtaggtttttcaggatctgatgcatct
gaagctcaattaaggtttcagtttgagaggtttggtccaatagaacaatttttcttcttt
ccaatgaaaggattttccttgattgagtacagaaacatcatggatgctataaaggctcgg
gactatatgcgacggcattttccatggcacgtaaagttcatggatgtaggactgggtact
aggggttctatgaagggagttgcagttggttctagttctcatgtttatgttggaaacgtt
tcaagccaatgggccaaggatgagatcctgcatgaatcaaggaaagtgcatcattataag
ggtccttacatggttactgagcttagcaatgaaggtgctgtactgatggaatttgaagct
cctgaagaagctgcatctgtaatggcccatctcagacagcatcgtatggaaagaagtaat
tatcgggcacctcctgctaatgttgcagtgcctatcaataaccttggaaacatgtctagt
agtagtattggatcacctcacactcgaactataccagggagccctgctgacagctgtagg
aagaggatgtctcacttatcttccttactttcatcattacgtgctaaatataatatcaat
caaagctcaagctactttgacagttatatatctggaaacagccatactgctatgatgagg
gaagaagataaagtgtcatcaagtactcttaggattaattttcctaatattagctcccca
ttcctcacagatgatgagctaatgacaatttgtagtcttgctgtgggcaatgttgggtct
gtagtcaggttgacacgagcaaatatgcagatggggtgtggttggtttgttgaatgtagc
agtatagatgctgcgattacagttttgaagaatctccgtggttgtcctggagtgttcttt
cagatagaattcagtcaaccaggaaagcaccatcctgcacctttcccagtgaaacacgag
agcagctctagggagcttgtatcccccagaatgaaacctgataatcacataaacactgca
caaggtggatattcatttcagtcaaactgggcagtatctggtagtacagaaatgcctgaa
attggagcgagaaaagttgatggttatgacaataaagcagtgatcgatccttcacaagga
ggtagccatgttgtttctggcactgctgaacaaatgtggacatataagaaacctgaagtt
gagctacattctgctcctgggaacattccatgcatgcccttgtcaacacggggaccacca
attccaccaccacagcaaattcattcatctccatttatgcgacctgcttaccttccacca
aatagtccctgggatgcacggggtttaaatcatcatatgcctttgaacccagtctctcca
ggtgtaatgcctaataattttcatggtaatgctccttttatacctgcctctgtgactcca
cttgcacagatacaaggaactccattgcagcattttgaccaaatgttttccttgcctgta
gttccaccacctttaatgtccctaccacctcctcagcctgaaatgccacctccattgcct
ccatctccacctcctttgcctcagtcacagccacctccacctccaccgccacctccacct
agttctccccctccccctccacctccacctgtttcagaaacatccaatatggaaagttcc
gggcaatgtccggaatatcagtggcagggcacattaagtaaaagtggggttcattactgc
acagtttatgcaaataaattggactccgatatttgcaaatattcaaaccccacttctgaa
cctgctgaatggcctgctaaattagacatgtccaaacgcacagatttccgtcatgtgaaa
tcaacattcactagtaccccaccacataaaagggaggtctgtcagctgcttccatcttct
gcaggcgaccacaaaggctttcaggatttcatatcatacttgaagcagagagaatgtgct
ggagtaatcaagatcccagctgcaaaatccatttgggcaaggcttctcttcatacttccc
tactcacatgatgcatgttccatgctctccattgcacctaatccatccgattgcctgatt
gcgttggttttgcctaaggaaacaaacttggaatgggcataagtttgacaggttggaagt
ttagaatggatcccaaaaaaaatgtcgaatcgatatgctaatgacaataggcaagacgga
aacaagggtttcactaaaaccacccagaagaaattcgtccccaaaaatcacaactcagct
ccaaaagaaccaaaccccaatcccacgctctcatcttctctcaggcaatcgctttcaaag
caaccggatgcggcggcggcggcggcttcgaagacaacgagtagggagaacagagagttg
gtgtccggcagagctgcgagtggcaatttcgtaaattacttgccccaagacgaggcggtg
gcggctgggctcggcccaaacgaagctggatcggatgcactgttgtctcagagtgttgtg
gatcttttgaatagggagttgtctcgtttgctcaagctcaatcctagagatttttggaga
gaagtggctagggactcttcattgcatgaatttttggatagcttcctacagtttaggagc
agatggtatgacttccctcatcgtggagcaaagggaatacttgcaggggtcattgttgga
gagcttgagttaagccgccgtgtctttatggtattgtatcgcatatcttctaatagagat
cctggtgctcgggcagctgattgtcttagtccaaaagatcatggagttattttgcaggaa
aagaagttgctggacttgcctaaattgttagatatatgtgccatctatggtcatgaaaat
gaagacttgaccagaatattggttgggaatgctttaaaagcacagcctaggatccatgat
aatttgactgcagtaatgtcacatttcctgagcattgttcacacaatgaatcaacgttgc
agctcatctttggaggtcctattttcctctggaagcagtgaagaccatggaaccagtcga
cttcatgctgattatttagaggtgatggacttcattaatgatgcaattgtatccatggat
gcttttgtgactgcatacaaacctgcagctgtgtacttcgcttgccctgctgagttaagt
ttagggaatgtggaattgctgaacacacttgcaaggttgcatgattcattgctaccatct
ctacagcgggggttcaggatcatctttaaagctgatgaaattgaaattatatctaaagtt
gcaataagcttgaagatgttatcaatgagaatagtcaagtttggttggaatttattggat
atttgctatctaagctctgaagtgttcggagatagctttcctgttccacctgccacaaag
atgtttccagccaatgtagaggattctttcataagggcagatattttagttcaaactctt
agggagatcaatggaatttccctacaatttcaggagaaccagaaccaagaaacttttctt
cagaatgttgaaaacgttcacaatgtaatgagcaaacttgagagtttacaaaatactgga
tggatattcatggaggatgaacagtttcagtatctatctgggataatgcattctccaaag
gcaactactaaggagccatcctctacaagaacccccatcacaagtaacaaagcacaggtg
gatgaagatgctgcagtaatggagtccaaaatcagtcagataaaggacctcttccctgat
tatggtaaaggttttcttgctgcctgtcttgaagtctataaccagaatccagaagacgtg
attcagaggattctagagggaacactccatgaagatctgaagtccttggactcttcacta
gagacaattccaatgcctaaatctgcttcgactgcaaagttgaaagataaagggaaaggt
aaacttgaggaacctgcatcaccaaaaaggaaaattgaatctacaacaccgtcatctact
agttcagtgtctgtaactagggagccaccggttgagggtccctcattttcatcctcatat
aatcttgggagatatgtcaggaagtcccaaatggacttgcctgattccaatatccttgat
agcaaaactgaaacagattcaacaagggctgctgctatagtttcacagtatgagtatgaa
gacgagtacgatgactcttttgatgatttgggtctgagcataggagagacaggaggagag
gagaatgagatactgggtgacaaaatgaggtcgaattcaggtaaatcttggggacaggag
attgaaaactctgctcaaaatgcacctagttcaaagtggggttccaagaagaagccccaa
tactatgtcaaggatggtaagaactacagttacaaggttgcaggttcagttgcagttgca
aatagcatggaagcatcattaatttcacaggctcaacaagaatccatttatggcctcgga
cgaggtggcaactttcctcttggtgcaatgaagaagctgactgagtcatatgaggaacaa
gataaccaattggatgttcctcaggcagaagggagaggaaatgtggggaacatgaggggc
aggggaagaaggggtggcgggggaagaccaagggagtctcacgaggagcaagataagcag
cagcctgatgcttctgagacggaagtgaggggaaatttggggaatttcagaggcagggga
aggaggggaggagggggaagaagcaacaattacagaaaggaccgtgccatgaataaacac
ttttccggattgactggaatttaa
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integrated database retrieval system
