Castanea sativa (European chestnut): 142612669
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Entry
142612669 CDS
T11266
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142612669
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
142612669
NCBI-ProteinID:
XP_075640911
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Position
10:21419548..21422858
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AA seq
585 aa
AA seq
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MNLTDDEEILKKLEDTTKDAACGQLEALRSILEHQSKGGGVRYLRPYLQGYDAPVDANTF
RQAVPLSSYEDYVDHIDQMANNGPVDHDHDQPLLSVDPLICFFFSSGASTMKPKLIPYFD
SKLSRAASFIAHQGSNAIHRRLFPPRQSVNKVLWFIYADNITTTKGGFKVMAASSYPMHS
SKANWSQLVSCSSPREVILGSNIEHQMYCHLLCGLRNSDSIDGIRAPYAISLINVFSLLE
SKWEQLCDDLEHGVPSSEISDVVMKDSVTEVLGGPQPELSRRIRLICEEKNWGGIVRKLW
PNVRYIRCVTTGSMKQYYPRLKRYAGEVPLLGGDYFASECCVGINLDIMQPPETTRFVLL
PTAAYFEFLPFALDEINVGEETVDISGVEVGKMYEVVVTTYRGFYRYRLGDIVRVVDFYN
SAPQVEYVMRAPKTSSEIINEKHLMSAVESFQRVIRKDMAAEISEFASFLDLMLSPKHLK
LYIEVREGCELLQEEKLEESVEILKRCGSSIEDSLGGIYMMQRKRGEIGPLAVSIVKPGS
FDRLSLVAIENGAPASQYKPPKIIRNRQIVDFMERCIVVTVSLDG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgacgacgaggagatcctgaagaagctggaggacacaaccaaggatgcc
gcgtgtggacagctcgaggctctaaggtccatcctcgaacaccaaagcaaaggcggcggc
gtacgttatctccggccttacctccaaggctacgatgcgccggttgatgcaaatacgttc
cgccaagctgtgccgttgtcttcctacgaggactacgttgaccacatcgatcagatggcc
aacaatggacccgttgaccatgatcatgatcagcctctcctgtccgttgatcctctcatc
tgtttcttcttcagctcaggagcaagtaccatgaagcccaaattgatcccttactttgat
tcaaagctctctagagccgcctcgttcatagctcaccagggcagcaatgcaattcatcgg
aggttatttcctcctaggcagtctgtgaataaggtcctatggtttatttatgccgataat
ataacaactaccaaaggtggttttaaggttatggctgcttcttcatatcctatgcatagc
agtaaggcgaactggtctcagttggtctcttgttcaagcccccgggaagtcattcttggg
tcaaacatagagcaccagatgtattgccaccttctttgtggccttagaaactctgattct
attgatgggattcgtgccccatatgccataagcttgatcaatgtgtttagtcttttagag
tccaagtgggagcagctatgtgatgatcttgaacatggggtcccaagttcagagatttct
gatgttgtaatgaaagattctgttactgaagttcttgggggccctcaaccagaattgtca
aggagaattcggttgatttgtgaggaaaagaattggggtgggatagtgcgtaaattgtgg
cctaatgttcggtacattaggtgtgttaccacagggagtatgaagcagtattatccaagg
cttaagcgctatgcaggagaggtacctttgttaggtggagactactttgcttcagaatgc
tgtgtgggtatcaacttggatattatgcagcctcctgagacaacccgattcgtgttgctt
ccaactgcagcttactttgagtttcttccatttgctttggatgagatcaatgttggtgaa
gaaacggtggacatttctggtgtggaggtaggaaagatgtatgaagtggttgtcactaca
tatagaggattctaccgatatcgtttaggtgatattgtgagagttgttgatttctataat
tctgctccacaagtggagtacgtgatgagagctcctaaaacttcgtccgagataataaat
gagaaacatttgatgtctgccgtggaaagttttcaaagggtcatcagaaaagatatggca
gcagagatttcagagtttgcaagtttcttggacttaatgttgagcccaaagcatttgaag
ctttatatagaagttagggagggatgtgagcttttgcaggaagagaagttagaggagtca
gttgaaattctcaagaggtgtggttcctctattgaggatagcttgggaggcatttacatg
atgcagaggaaaagaggtgaaataggtcctttggcagtatccattgtaaagccaggtagc
tttgatagattatcattggtagccattgagaatggagcaccagctagtcaatataaacca
cccaagattataagaaatcgccaaattgttgacttcatggaaagatgtattgttgttact
gtatctttggatggttaa
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