Castanea sativa (European chestnut): 142612879
Help
Entry
142612879 CDS
T11266
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csaa01001
]
142612879
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142612879
Enzymes [BR:
csaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
142612879
Protein kinases [BR:
csaa01001
]
Serine/threonine kinases: Other
Other
142612879
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
142612879
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCAF1_helical
DCAF1_4th
Mahjong_helical
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
Beta-prop_WDR3_2nd
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
LisH
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
142612879
NCBI-ProteinID:
XP_075641168
LinkDB
All DBs
Position
10
Genome browser
AA seq
1977 aa
AA seq
DB search
MEAVMNDQANQGGEDEEAQPPQPPPVSESQPQSQVEEEEEEDEEEEEEEEEPRNEDDELI
AKAQKLMEKITSSPENPSSSALHALASLLETQESRYMEENGHSPNNIRASHNIGRLGSLV
RENDDFFELISSKFLSEARYPPSIQAAASRLLLSCSLTWIYPHVFEEAVLENIKNWVIDD
ASRIPSVDHKCPDYEMLKTYSTGLLAVSLAGGTQVVEDVLTSGLSAKLMRYLRVRVLGET
NTSQKDANHLTENKTASAATIIRGRDEGRGRVRQVLETTYLDDLRGAEERSIDDQCVERD
QDRSIVWQGRGEECWVNDGEPPNALDEEFDNYEADADGEDRWHSRDLRDGKNKFGDLDEN
TRDDSLRRRTNRGLRSRSKGRVNEGALENEHLLTSPGSGSRLGQGRSTMRSFSRHLDIKK
VPDARKPYGRITSDAVPVEREDNDDCFQECRIGSKDISDLVKKAVRAAEAEARAANAPAE
AIKAAGDAAAEVVKSAASEEFKATNNEEAAVLAASRAASTVVDAGNALEVSRSSITVKDD
TMIQGGPEAETNEDVEEYFIPDSESLAQSREKYCIQCLEILGEYVEVLGPVLHEKGVDVC
LALLQRSSKHKEASKIAILLDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRVAQTFLG
LSSCLFSIGSLQGIMERVCALPSDIVHQVVELAIQLLECSQDQARKNAALFFAAAFVFRA
VLDAFDAQDGLQKLLILLNDAASVRSGVNTGALGLSSSGSFRNDRSSAEVLTSSEKQIAY
HTCVALRQYFRAHLLLLVESIRPNKSNRIAARNISSVRAAYKPLDISNEALDAVLLQLQK
DRKLGPAFVRTRWPAVEKFLSSNGHITLLELCQAPPVERYLHDLLQYALGVLHIVTLVPN
TRKMIVSATLSNNRVGIAVILDAANSASSYVDPEIIQPALNVLVNLVCPPPSISNKPPLL
AQGQHSVSAQTSIGPAIETRDRNTERNISDRAVNSSSQSDQRDRNGESSVVDRGGTAGNT
QSVSSTSQTPVAPATSGLVGDRRISLGAGAGCAGLATQLELGYRQAREAVRANNGIKVLL
HLLQPRIYSPPAALDCLRALVCRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGSQTTG
TEQGRWQAELSQAAIELIAIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRE
LLLLIHEHLQASGLGSTAAALLKEAQLTPLPSLAAPSSLTHQSSSQEAPPMQLQWPSGRV
PSGFFTEKSKPAARDEDTSLKYDSTVFSSKKKPLAFSPSFGFQSKNQLLCHDSHSASVRK
IFITSKQSSEHATVSETPARSETSSESLPNPNFDAESQCKTPIVLPMKRKLSELKDIGSF
SFSGKRFHASEQGLRSPVFPTPNSVRKSNLLVDTIGLSTPSSNLRDQHGRSTPSSCLGDY
VDDSPYANIHMGQGTPFSQFGLLNDPQAISTERLTLDSLVVQYLKHQHRQCPAPITTLPP
LSLLHPHVCPEPKRSLEAPSNVTARLGTREFRSMYGGVHGNRRDRQFVYSRFRPWRTCRD
DVVSLLTCINFLGDSSRLAVGTHTGELKIFDSNSNNVLESCISHQSPMTFIESYLSGDTQ
LVLSSSSQDVRLWDASSISGGPMHPFEGCKAARFSNSGNIFAALSSEPGQREIFLYDIQT
FQLELKLSDTYASSTGRGHIYSPIHFSPSDAMLLWNGVLWDRRGPAPVHRFDQFTDYGGG
GFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTMITFNARGDVIYAILRRNLEDAMSAVH
TRRSKHALFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQEEMISSAR
VYEIGRRRSTDDDSDPDDAESEEEDEDDDDDDDDGDMDSLLGPDLDGDGDSDADDVSNDD
DSVSDLDDDEDDGDFIMDGGGILEIVTDGDEDDDDSQLIESYSSDDEDDFVGNAFGY
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtcatgaatgaccaagcgaaccaaggtggtgaagacgaagaagctcagcct
ccacaaccaccacctgtatcggaatctcagcctcagtctcaagtagaagaagaagaagaa
gaagacgaggaggaagaagaagaagaagaggaaccgagaaatgaagacgacgagttgatc
gccaaggctcagaagctcatggagaagatcacttcctcgcctgaaaaccctagctcctcc
gctctccatgccctagcctctctcctcgaaactcaagaatcgcgatacatggaagagaat
ggtcattcccctaataatattcgtgcttcacataacattggacggcttggaagcttagtc
cgggaaaatgatgacttcttcgagttgatatcttcaaagtttttatcagaagcaagatac
ccaccctccatccaggcagctgcttcaaggcttcttttaagctgctcactgacttggatt
tatcctcatgtttttgaagaagccgttttggagaacataaaaaattgggtgattgatgat
gcttccagaattcctagtgttgatcacaaatgccccgattatgaaatgttgaaaacctat
tctactggacttcttgctgtatctttggcaggtggtactcaggtagtagaagatgtgttg
acatctggattgtctgccaagcttatgcgctatcttcgtgtgcgtgtccttggggagaca
aatacaagccagaaagatgctaatcatttaacagagaataagactgcatctgctgctact
atcataagagggagggacgaaggccggggtagggtaaggcaggttctggaaacaacttat
ttagatgatctgaggggagcagaggagagatccatagatgaccaatgtgttgaaagggat
caggatagaagcattgtttggcaaggacgtggagaagaatgctgggtgaatgatggtgaa
ccacccaatgccttggatgaagagtttgataactatgaggcagatgccgatggtgaggac
agatggcatagtcgagatttgcgtgatgggaagaataaatttggggatcttgatgaaaat
acaagggatgactctttaaggcgcagaacaaaccgtgggttgagatccagaagcaaggga
agggttaatgaaggtgctctagagaatgaacatcttttaacctcacctggatctggtagt
cgactaggacaggggcggagtacaatgaggagtttttcaagacatttagacataaaaaaa
gtaccagatgctagaaagccttatggcaggatcacatctgatgctgtgcctgtcgaaaga
gaggataatgatgactgctttcaagaatgtagaattggatctaaagatatatctgatctg
gtaaagaaggcagttagagctgctgaagctgaagcgagagcagccaatgcacctgcagag
gctatcaaagcagctggcgatgctgccgctgaagtggtcaaaagtgcagcttctgaggaa
tttaaagctacaaacaatgaagaggctgctgttttggctgcttccagagctgcatccact
gttgtagatgctggaaatgcacttgaagtttcaagaagctctattactgtcaaggatgac
acaatgattcaaggcgggcccgaagcagaaaccaatgaggatgttgaagaatatttcatc
ccggactccgaatctctggcacagtcgagagaaaaatactgtattcagtgtcttgagata
cttggagagtatgttgaagttcttggacctgtgctgcacgaaaagggggttgatgtctgt
cttgcactgttgcaacggagttccaaacacaaggaggcatcaaagattgcaatcttgctt
gatgtaatgaagctaatctgtgcattagctgctcacaggaaatttgctgcattatttgtt
gatcggggtggcatgcagaaactgcttgctgtccctagggtcgctcaaaccttccttggt
ctttcttcctgcttatttagtattggttctctgcagggaataatggaacgtgtatgtgct
cttccctcagatattgttcaccaggtggttgagttagctatccaacttcttgagtgctcc
caggatcaagctagaaaaaacgctgccttgttttttgctgctgcatttgtcttccgagca
gttcttgatgcctttgatgctcaggatggcttgcagaaattactcatcctgttaaatgat
gctgcctcagtaagatctggagtaaatactggagcattaggcttgtccagttcaggatca
tttcgaaatgatcgttcatccgcagaagtactgacatcatcagagaagcagatagcgtac
cacacttgtgttgctctgcggcaatattttagagctcatctccttttgcttgtggaatcc
attcgtccaaataaaagcaatcgaattgcagcccgcaatatatcaagtgtaagggcagcc
tacaagccacttgacatcagtaatgaagctttggatgcagtccttctgcagctacagaag
gatcggaagctgggtccagcatttgtaagaactcgctggcctgctgttgagaagttctta
agttctaatggacatattacattgttggaattatgtcaggccccacctgttgagcgttat
ttgcacgatttgctccaatatgcactgggtgttttgcatattgttacattagtacccaat
acccgcaagatgattgtaagtgccacattaagcaataatcgcgttggtatagcagtcatt
ttggatgcggcaaatagtgctagtagttatgtggacccagagatcattcaaccagcacta
aatgtattagtcaatcttgtttgtccaccaccttcaatcagcaataaaccgcctctactt
gcacaaggccaacattctgtttccgcccaaacctcaattggtcctgccattgagactaga
gataggaacacagaacgtaatatctcagatcgagctgttaacagttccagccagagtgat
caaagggaccggaatggggaatctagtgtggtagatagaggcggtactgcaggtaatacg
caatctgtcagtagcacttcacaaactcctgttgccccggccacttcaggacttgttgga
gatcgtagaatatctttaggtgctggagcaggttgtgctggccttgctacacaattggaa
cttggatatcgtcaagcaagagaggcagtacgtgccaacaatggcataaaggttcttctc
catctactccaaccacgcatatattcacctcctgctgctcttgattgtcttcgtgctctt
gtatgccgagtccttcttggtctagccagggatgatgctattgcgcacatactgacaaag
cttcaggttgggaaaaagctatcagaactaattcgggattcaggcagccagacaactgga
accgagcaaggcaggtggcaagctgaactttcccaggcagcaattgagctgattgcaatt
gtgacaaattcagggcgtgcaagtactttagcagctactgatgctgctacacctactttg
aggcgcatagaaagagcagctatagctgctgctactcctattacttaccattccagggaa
cttttacttctaatccatgaacacctacaggcgtctggtttgggttcaactgctgctgca
ttgttaaaagaggctcagttgacacctttgccatccttggcagctccatcatctctcaca
caccaatcctcttcacaggaagccccccctatgcaactccagtggccctctggtcgtgtg
ccaagtggatttttcacagaaaaatctaaacctgctgcacgggatgaggatacaagctta
aagtatgattcaactgtattttcttcaaagaaaaaaccactagctttctcgcccagtttt
ggttttcagtcaaaaaatcagttgctatgccatgattctcactcagcatctgtcaggaaa
atcttcattacttcaaaacaatcatctgaacatgcaactgtatcagaaaccccagctaga
tcagaaacttcatctgagtcattgccaaaccctaattttgatgcagagtcccagtgtaag
acaccaattgtattgcctatgaagcgcaaattatcagagctaaaggatattgggtcattt
tcattctctggaaagcgatttcatgcaagtgagcaaggacttcggtctccagtttttccg
acacccaattctgttcgtaaaagcaatctactagttgataccattgggctttctacacca
agttctaacctaagagatcagcatgggcgatcaacaccaagtagttgcttgggtgattat
gtggatgacagcccatatgctaacatccatatgggtcaggggacaccgttctcacaattt
gggcttttaaatgatcctcaagccatcagcacggagcgtttaactctagactctcttgtt
gttcaatatctgaagcatcagcatcgccaatgccctgcccccataaccactcttccacca
ctctctctcttacatccacatgtttgtcctgaaccaaaaagaagccttgaagccccatcc
aatgtaacagcccgacttggtacacgtgagtttagaagtatgtatggtggggtacatgga
aatcgcagagatcgtcagtttgtttacagcagatttagaccatggagaacttgtagagat
gatgttgtttcccttttgacgtgcattaattttcttggagactcatcccgtcttgcagtt
ggcacccacactggagagctcaaaatttttgactccaacagcaacaatgtgctggagagc
tgcataagccatcagtctcctatgacatttattgagtcatatctttctggtgacacgcag
ttggtgctttcttcaagctcccaagatgtaaggttgtgggatgcatcttcaatctcaggt
gggccaatgcatccatttgaagggtgtaaggcggcaaggtttagcaattctggaaacatt
tttgcagccctatcatcagaacctggacaacgggaaatcttcctgtatgatattcagacc
ttccagttggaattgaaactatcagacacatatgccagttctactggtcgggggcatatt
tattcgccaatccatttcagcccttcagacgccatgctgctatggaatggggtcctgtgg
gatcggcggggtcctgcccctgttcatcgctttgatcaatttacagattatggaggtggt
ggttttcatccagctgggaatgaggtaattataaactctgaggtctgggatctccggaag
tttaggctcctccgaagcgtaccttctttagaccaaacaatgataacatttaatgcacgc
ggtgatgtaatttatgcaatccttaggagaaatcttgaggatgcaatgtcagcagttcac
acacgtcgatccaagcatgccctctttgctgcattccgcacagtggatgcagtcaactac
tccgacattgccactattccagtggatcgttgcgtccttgactttgcaacagaaccaaca
gattcctttgtagggttgattacaatggatgaccaagaagagatgatttcttctgctagg
gtttatgaaatcggtcgccgaaggtcaaccgatgatgattctgatcccgatgatgctgag
agtgaggaggaagatgaggatgatgacgacgacgatgatgatggtgatatggacagctta
ctgggtccagatcttgatggggatggtgatagtgatgctgatgatgtgagcaatgatgat
gatagtgtaagtgatcttgacgatgatgaagatgatggggatttcatcatggatggggga
ggaatactggagattgtgaccgatggtgatgaggatgacgatgatagtcaactgatagaa
tcttatagtagtgacgatgaggatgattttgtgggcaacgcatttggttactaa
DBGET
integrated database retrieval system
