Castanea sativa (European chestnut): 142613009
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Entry
142613009 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142613009 isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142613009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142613009
Spliceosome [BR:
csaa03041
]
Common components
Common spliceosomal components
SR proteins
142613009
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
142613009
NCBI-ProteinID:
XP_075641304
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All DBs
Position
10:complement(33443596..33447774)
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AA seq
247 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA
FVRYKYADEAQKAVERLDGKVVDGREIMVQFAKYGPNAERIHKGRIIESSSKTKGGSRSR
SPRPRHRDEHRDRDYRRRSRSRSRERSDRDRNRGRERDRRRSRSRSASPDHHKDRGRGRY
DDERRSRSRSYDSPNPRRSLSPRRTPRDESPDAHNHNESSPVPKTASPNGRVVDSRSPSP
RRSDADE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttgggagatctggccctccagacatcagagacacctactccctcctcgtc
ctcaacatcactttccgtaccaccgcagacgatctttttcctctcttcgacaagtacggc
aaggtcgtcgacgtgtttatccccagagaccgaaggaccggagaatcgcgaggtttcgct
ttcgttcgatacaagtacgcggacgaggcgcagaaggcggtggaaaggctcgacggaaaa
gttgtcgatggcagagagattatggttcagtttgccaagtatggcccaaatgctgagcga
attcacaaagggaggataatagagtcatcttccaagacaaaaggagggtcaaggagtcgt
agccctcgtcctagacatcgggatgaacatagggacagggattacagaaggagaagtcgc
agtaggagtagggagcgatctgatcgtgacaggaatcgtgggagggaaagagatcgtcgc
cggagcaggagccgtagtgcaagtcctgatcatcacaaagatcgtgggagaggcagatat
gatgatgagcggcgtagtcgaagcaggtcctatgatagtcccaatcctcggaggagcctg
tccccacgtaggacacctagggatgaaagtcctgatgcacacaatcacaatgaaagctct
cctgtaccaaaaactgcttcaccaaatggtcgagttgttgattctcgaagcccatctcca
cgtagatctgatgctgatgaatga
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