Castanea sativa (European chestnut): 142613010
Help
Entry
142613010 CDS
T11266
Name
(RefSeq) auxin response factor 5
KO
K14486
auxin response factor
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142613010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
E6
Motif
Other DBs
NCBI-GeneID:
142613010
NCBI-ProteinID:
XP_075641308
LinkDB
All DBs
Position
1:complement(10922250..10929700)
Genome browser
AA seq
954 aa
AA seq
DB search
MGCVEEKVKAGGSGFMGGSGAHTTCLLEEMKLLKEMQDQSGARKTINSELWHACAGPLVS
LPQLGSLVYYFPQGHSEQVAASTKRTVTSQIPNYPNLPSQLMCQLQNVTLHADKDTDEIY
AQMSLQPVNTEKDIFPVPDFGLKPNKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPP
LDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDAVLFIR
DEKSHLMVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSE
FVIPLSRFRKSVFGTQLSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNL
QVEWDEPGCCDKQNRVSPWEVETPESLFIFPSLTSGLKRPFHSGFLGTETEWGNMVKRPL
VRVPANGNGDLPYPIPNICSEQLIKMLLKPQHMNHPGNFYPTVQQESATKVDPLRDMKTM
QQGTTNQKSHIICSEGTPSIQPQSCLDQPDAMNLNSSSKAMPPGKFNSLAECENRTLAGI
NTEKPIIEPEISTDELSQLTSTGECNEEKLVACPVTQNLVNQPTFINQNQEPLQSQTSSW
PMQPQLESLIYHPQQLDVPQSDCSNPNGFLPSLDPDEWKFYPSCQPLGGMFRSPGPLSMF
GLQDSSALFPEAVNPALPPMGQEMWDHQLNNLRILSQADQLTSFSHQDSRNLSCISNSSG
LRDLSDESYNQSGIYSCANIDVNNGGSTAVDPSVSSTILDDLCTVKNTGFQNPSDCLVGN
FSSSQDVQSQITSASLGDSQAFSRQELPDSSGGTSSSNVDFDEGSLLQNSSWQQVVPLVR
TYTKVQKKGSVGRSIDVTGFRNYDELCAAIECMFGLEGLLNDPRGSGWKLVYVDYENDVL
LVGDDPWEQFVRCVRCIKILSPSEVQKMSEEGMQLLNSAAMQGTNGPMSEGGYA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtgttgaagagaaagtcaaagctggaggaagtgggttcatgggtggaagtgga
gcacacacaacatgtctgcttgaggagatgaaattgttgaaagaaatgcaggatcagtct
ggggccaggaagactataaactctgagttatggcacgcgtgtgctggtcctcttgtttca
ttgcctcagctggggagtctagtgtactacttccctcaaggtcacagcgagcaggtagct
gcttccaccaaacggacagtaacgtcacaaattcccaactatccgaatcttccatctcaa
ttgatgtgccaacttcaaaatgttacattgcatgcagacaaagatacggacgaaatttat
gctcaaatgagtcttcaacctgtaaacacagaaaaagacatcttccctgtaccagacttt
ggactcaagcccaacaaacatccaagtgagtttttctgcaaaactttaactgcaagtgat
acaagcacacatggtggcttttcagtaccacgcagggcagcagaaaagctttttcctcct
ttggattatacaatgcaaccaccaactcaagaacttgttgtccgggacttgcatgataac
acgtggacgtttcgccacatataccgcggccagccgaagcgacaccttctcacaactgga
tggagtttgtttgttggtgccaaaaggcttaaagcaggagatgctgtcctgtttatcagg
gatgaaaagtcacatttaatggtaggtgtgaggcgtgcaaaccgtcagcaaacaacatta
ccctcatcagttttatctgctgatagcatgcacattggtgtccttgctgctgcagctcat
gctgcagcgaaccgaagcccattcacaatattctacaacccaagggcatgtccttcagaa
tttgtcattcctttgtcaagattccgtaaatctgtctttgggacgcaactctctgttggc
atgaggtttgggatgatgtttgaaacagaggagtccggtaagcggaggtatatgggtaca
atagttggcattagtgacttagatccactgaggtggcctggttccaagtggagaaatctt
caggtggagtgggatgagccagggtgttgtgataaacagaatagggttagcccgtgggaa
gttgagactcccgaaagtcttttcattttcccttctctgacttcaggtctcaaacgcccg
tttcactctggatttttgggaaccgaaaccgaatggggaaatatggttaaaaggcccctt
gtccgggttcctgctaatggaaatggggatcttccatacccgatacctaatatatgctca
gaacaactaatcaagatgctgttgaaacctcaacatatgaaccatcctggaaacttttat
cctactgtacaacaagaatctgctacaaaggtggatccattacgagatatgaagaccatg
cagcagggcacaaccaaccaaaaatctcatattatctgttcagagggtacaccttcaatt
cagcctcagtcatgccttgaccaacctgatgccatgaacttaaattcatcatcaaaagca
atgccacctggaaaatttaactctctagctgaatgtgaaaaccgaacactggctggaatt
aatactgaaaagccaattatagaacctgagatttcaacagatgagttaagccagttgact
tcaacaggagagtgcaatgaggaaaaactggttgcatgccccgtaactcaaaaccttgtg
aaccagccaacattcattaaccagaaccaggagccattgcaatcacaaacaagttcgtgg
cctatgcagccgcaattggaatcattgatctaccatccccaacaacttgatgttccccag
tccgattgttcgaatccaaatggctttcttccatccctagaccctgatgaatggaaattt
tacccctcttgccaacctcttggtggaatgtttagatctcctggacctttatctatgttt
ggattgcaagattcttcggcattgtttcctgaagcagttaatcctgctttacctccaatg
ggtcaggaaatgtgggatcatcaactaaataatttaaggattttatcccaagctgaccag
ctcacttcattttctcaccaagactcacgtaaccttagttgtatatccaattcaagtggt
ctaagagatttgtcagatgagagctacaatcaaagtgggatttacagttgtgctaacatt
gatgttaataatggtggaagtactgcagtagatccttctgtttcaagcaccattctggat
gacctatgtacagtgaagaacactggattccagaatccttctgattgtttagttggcaac
ttcagttcaagtcaggatgttcaatctcagattacctcagcaagcctaggagactctcaa
gctttctctcggcaagaattaccagacagctcaggaggtacatcttcaagcaatgtggat
tttgatgagggcagtcttctacagaatagttcgtggcagcaagtagttccacttgtgcga
acctatacaaaggttcaaaaaaaaggatctgttgggaggtcaattgatgtcacaggtttt
agaaattatgatgaactatgtgctgcaattgagtgcatgtttggacttgaggggctgctc
aatgacccaagaggttcagggtggaaactagtctatgtggattatgagaatgatgttcta
ctcgttggggatgatccttgggagcaatttgttcgttgtgtacgctgcatcaaaatttta
tcaccttcagaagttcagaagatgagtgaagagggaatgcagcttctaaacagtgctgca
atgcaagggactaacggccccatgtcagaaggtggatatgcttga
DBGET
integrated database retrieval system
