Castanea sativa (European chestnut): 142613099
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Entry
142613099 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142613099 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
142613099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142613099
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142613099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
Motif
Other DBs
NCBI-GeneID:
142613099
NCBI-ProteinID:
XP_075641409
LinkDB
All DBs
Position
10
Genome browser
AA seq
2529 aa
AA seq
DB search
MDKEIEILTRLAANHLHLAQFEPLRAVLLALRSRNPDLALAVLQTIVARSGRFQNILWSD
SCPSPPLLTYMSTLELLQQFDDNSNASSAWSFDPETLRLRAEFLLLVQHLIDRVSESMRN
NFDLQSLEKEVLNESEGYDERAEVLEREKCEELRDVNGGFDECVRVLDRVLELGIKRLKP
DDVDGDGNDIDMSSVEEIELVCLKRVILDYADVFDALCWNIQRQVRGWEGFDSGLAETTR
SEEEGEDLRVLGLIQRSVQLAHLDAIKECLKEGNVDGAVPRIRFLHTDYGVEEDEYRMVL
QDLIRSVSSRKGIFGDSWHAVRENFLGIYGEALSSNCRDLVQMIQVIQDEFLSEEIETYK
ALDDSQIPPPLECFQRYLAELKSDTNIYEKTSSLNVAVSSCMRDMYHYARVSNLHVLECV
MDSALSAVKREQLQEASNVLMLFPRLQPLVASMGWDLLSGKTTARRSLMQQLWTSKSQVL
RLEESSLYGNQSDEISCVEHLCDNLCYQLDVASFVACVNSGRSWNSKFSLLLSGKEQIAL
AEEVAQSDSFVENFVLERLSVQSPLRVLFDVVPGIKFQEAIELISMQPIASPTDAWKRKQ
DVELMHMRYALESVVLALTAMERCTGDERESHLQSALCYLKDLQNHLEAINNIARKILMV
NVIISLLHMDDLSLNLTHCVSPERDSKSCYTHARENYDLTPCDGGNEMVISFMGILLDIL
NRNLPSAVIELEQALSEGVIMGGRQALEWRVSIAKRFIEEWEWRLSTLQRLLPLSERQWR
WKEALTVLRAAPSKLLNLCMQRAKYDIGEEAVHRFSLSAEDKATLELVEWVDSAFRRASV
EDVVSRAADGTSAVQDLDFASLRSQLGPLAAILLCIDIAATSARSAKMSQQLLNKAQVML
SEIYPGGAPKMGSTYWDQILEVGVITVSRRVLKRLHEFLEQDSPPVLQALLSGEMIFSLS
KESHRQGQRERALAMLHQMIEDAHRGKRQFLSGKLHNLARAVADEETEPNFSKGEAPSSD
RKILSNTDKDGVLGLGLRAVRQIPLSSMAGETGAQPVIYDLKDTGKRLFGSLSTKATTYL
SQFILHIAAIGDIVDGTDTTHDFNFFSLVFEWPKDLLTRLVFDRGSTDAAGKVAEIMGAD
FVHEVISACVPPVYPPRSGHGWACIPVIPTCPESGSENKLLSPSSKEAKPNCYRRSSATT
GIPLYPLQLDIVKHLVKMSPVRAVLACVFGSSILYSGSDSSISGSLNDGLVQAPDADRLF
YEFALDQSERFPTLNRWIQMQTNLHRVSEFAVATKQTSDHTKRKPEATSAIKRLREHDND
TESEIDDIVSSTNVSTALQDFNGQGDAAPDLWRDSSKSELAELDNTVFLSFDWENEEPYE
KAVERLIDEGKLMDALALSDRFLRNGASDCLLQLLIERGEENHSISGQPPGYGGHNIWSN
SWQYCLRLKDKQLAARLALKYMHRWELDAALDVLTMCSCHLPQSDPLRNEVLHMKQALQR
YSHILSADDHHSSWQEVEAECKEDPEGLALRLAGKGAVSAALEVAESAGLSIDLRRELKG
RQLVKLLTADPLNGGGPAEASRFLSSLRDSDDALPVAMGAMQLLPNLRSKQLLVHFFLKR
REGNLSDVEVLRLNSWALGLRVLAALPLPWQQRCSSLHEHPHLILEVLLMRKQLQSAALI
LKEFPVLRDNNIIIAYAAKAMAVSISSPPREHRISVSGARPRQKTKAGIPPRSSFTSSLS
NLQKEARRAFSWAPRNTGDKAAPKDAYRKRKSSGLTSSEKVAWEAMTGIQEDRVSSYPAD
GQERLPSVSIAEEWMLTGDAIKDESVRASHKYESAPDITLFKALLCLCSDESVSAKSALD
LCINQMKSVLSSQQLPENASMETIGRAYHATETIVQGLLYCKSVLRKLTGSTEISSNSDR
NRDADDASSDAGSSSVGSQFTDELSEVLSQVEIWLGRAELLQSLLGSGIAVSLDDIADKE
SSERLRDRLSVKERYSMAVYTCKKCKIDVFPVWNAWGHALIRMEHYAQARVKFKQALQLY
KSDAAPVILEIINTIEGGPPVDVSAVRSMYEHLAKSAPTILDDSLSADSYLNVLYMPSTF
PRSERSRRAQESENNNSSLSSEFEDGPHSNLDSVRYVECVNYLQDYARQHLLSFLFRHGH
FNDACVLFFPPNAVPPPPQPSILGGVATSSSSPQRPDPLATDYGTIDDLCDLCIGYGAMS
VLEEVISTRMSSLNPQDVAVNQYTAAALVRICIYCETHKHFNYLYKFQVIKKDHVAAGLC
CIQLFMNSSAQEEAIKHLEHAKMHFDEGLSARHRGGDSTKLVTKGIRGKSASEKLTEEGL
VKFSARVSIQLEVVRSFNDSDGPQWKYSLFGNPNDLETFRRRCKIAETLVEKNFDLAFQV
IYEFSLPAVDIYAGVAASLAERKKGSQLTEFFRNIKGTIDDDDWDQVLGAAINVYANKHK
ERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVLDM
CKQWLAQYM
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagagatcgagatcctcacacgcctcgcggcgaaccacctccacctagctcag
ttcgagccactccgagcagttctcctcgctctccgatcccggaacccggacctcgctctc
gccgtcctccaaacaatcgtggctcgatcgggccgtttccagaacattctatggtcggac
tcgtgtccatctccgcctctcctcacctacatgtccactctcgaactcttgcagcaattc
gacgacaacagcaatgcctcgtcggcgtggagcttcgatcccgaaacgctccggctacgc
gccgagttcttgttactagttcagcacctgatcgaccgggtttcggagagcatgcggaac
aatttcgatctccaaagcttggagaaagaggtgttgaacgagagcgagggttacgacgag
cgagcggaggttttggagagggaaaagtgcgaggaattgagagatgtgaatggcggattc
gatgagtgtgtgagggttttggatagggttttagaattggggattaagaggttgaagcca
gatgatgttgatggtgatggcaatgatattgatatgagttcagttgaggaaattgagttg
gtgtgtttgaagagagtgatattggattacgctgatgttttcgacgcattgtgttggaat
atacagcggcaagttaggggttgggagggttttgattctggtttagctgaaacaacgcgg
tccgaggaggagggggaggatctgagggttttggggttgattcaaaggagtgttcagtta
gctcacttggatgctattaaggaatgcttgaaggagggtaatgtagatggagcggttcct
cgaattcgttttcttcacactgattatggtgtggaagaggatgagtatcgcatggttttg
caagatctaatcagaagtgtttcgtcaagaaagggtatttttggagactcatggcatgct
gtgcgagaaaactttctagggatctatggagaagctctctcatcaaattgcagagatctc
gttcaaatgattcaggtgattcaagatgagtttctttctgaagagattgagacatataaa
gctcttgatgacagccagattccacctcctcttgagtgctttcaaagatatcttgcagag
ttgaaatctgatacaaatatatatgagaagacttcatcgttgaatgtggcagtcagttct
tgcatgagagatatgtaccattatgctcgtgtttctaatttacatgtacttgaatgtgtc
atggatagtgccctatctgctgtgaagagggagcagcttcaagaagctagcaatgttctt
atgttatttcctcgacttcagcccttggtggcttccatgggttgggatttattgtccggt
aaaacaacagcacggaggagtttaatgcaacagctgtggacaagtaagtctcaggtactt
cggctggaagaatcttcactctatggtaatcaatcagatgagatatcttgtgtggaacat
ctttgtgataatttgtgttatcagcttgatgttgcctcttttgttgcctgtgtcaattct
ggtcgatcatggaattcaaaattctcattgttgttatcgggaaaagaacaaatagcatta
gcagaggaagttgcccagtcagactcttttgttgagaactttgtgttggaaagactctct
gtacaaagtccgcttcgggtattgtttgatgttgttccgggcataaaattccaggaagct
attgaattgatcagcatgcagccaattgcttctcccacagatgcttggaagagaaagcaa
gatgttgaactcatgcacatgcgttatgctctggaatcagttgttcttgcattaacagca
atggaaaggtgtactggtgatgaaagagaaagtcatcttcaatcggcattatgctatttg
aaagacctgcagaaccatctggaagctattaataatattgcacgcaagatattgatggtg
aatgtcataatttctcttttacatatggatgatctttctctgaatttgacgcattgtgtc
tccccagagagagattctaaatcatgctacacccatgctcgggaaaattatgatctcact
ccatgtgatggagggaacgaaatggttatatctttcatggggattctacttgatatatta
aatcgcaatcttccatcagctgtgattgaactagagcaagcattgagtgagggcgtaata
atgggtggaagacaggccttagagtggagagtctcaattgctaaacgtttcattgaagag
tgggaatggcggttgtcaactttgcagcgccttttaccattatccgaacgccagtggaga
tggaaggaagcattgactgtattacgtgcagccccctcaaagctactcaacctttgcatg
caaagagcaaagtatgacattggagaagaggcggttcatcgattttcattatctgctgaa
gataaagcaacccttgaattagttgaatgggtagatagtgccttcagaagagcttctgta
gaagatgtagtgtctcgtgctgctgatgggacttctgcagtacaagatctagattttgcc
tctttacgctcccaattaggtcctttggctgcaattcttctttgcatagacattgccgct
acttctgcaaggtctgcaaagatgtcccaacagcttttgaataaggcgcaagttatgttg
tcagagatatatccaggaggtgctccaaagatgggctccacttactgggatcaaatcctt
gaagttggagtgattactgtttcacggcgtgtcctcaagcgtttacatgagttcttggaa
caggatagccctcctgtccttcaggcccttttgtctggggaaatgatcttttctttgtct
aaggagtcccaccgacagggacaaagggaacgcgctcttgcaatgctacatcagatgatt
gaagatgctcacaggggcaagcggcagtttttaagtggtaagcttcataatcttgcaaga
gcagttgctgatgaagaaacagaacctaatttttcgaaaggggaagccccatcatctgat
cgaaagattctctccaatactgacaaggatggtgttcttgggcttgggttaagagctgtc
agacagatacccttaagctcaatggctggggaaactggtgcacaacctgttatttatgat
ctaaaagatactgggaagaggttgtttggttctctaagtaccaaggccacaacgtatcta
tcacaatttattctccatattgctgcaattggtgacattgttgacgggactgatacaact
catgatttcaattttttttcccttgtgtttgaatggcctaaggatcttttaactcgtctg
gtctttgaccgaggcagcactgatgccgctggaaaggttgctgaaattatgggtgctgat
tttgtacatgaagtgatttctgcatgtgtacctccagtttatcctccgcggtctggccat
ggatgggcgtgcattcctgtcattcctacctgccccgagagtggctctgaaaataaacta
ctctccccttcttctaaagaagctaaacctaattgttaccgtcgttcctcagcgaccacc
ggaatccctctataccccctccaattggatatagtaaaacatctggttaaaatgtctcca
gtgagggctgtcttagcatgtgtttttgggagcagtatattgtactctggcagtgattct
tctatatcaggctccttaaatgatggattagttcaggcacctgatgctgacaggttgttt
tatgagtttgcgcttgatcaatctgagaggttcccaactttaaatcgatggatacaaatg
caaactaaccttcatcgagtctcagaatttgctgtagcaaccaagcaaacatctgatcat
accaagcgtaaacctgaagcaacatctgctattaagagactccgtgagcatgacaatgat
actgagtcagaaatcgatgacattgttagcagcactaatgtttcaactgctttgcaagac
ttcaatggtcaaggggatgcagctcctgatctttggcgtgattcttcaaaatctgagtta
gctgaacttgataatacagtttttctttcttttgattgggagaatgaagaaccctatgag
aaagctgttgaacggttgattgatgaaggaaaactaatggatgctcttgcactttcggat
cgctttctacgtaatggagcctcggactgtttacttcagctactcattgaacgtggggaa
gagaatcattcaatctctggacagcctccaggatatgggggccacaacatctggagcaat
agttggcagtattgcctgcggttgaaggacaaacaactggctgctagacttgccctcaag
tatatgcacagatgggagcttgatgctgctttggatgttttgaccatgtgcagttgccac
ctgccacaaagcgatccacttaggaatgaggtcttgcatatgaaacaagctttacagagg
tacagccacatattaagtgcagatgatcatcatagcagctggcaagaggttgaagcagaa
tgtaaggaagatcctgagggcttggcacttagactagctggaaagggagctgtttctgct
gctttagaagtggctgaaagtgctggattatctatagacttgcggagagaacttaagggc
cggcaacttgtgaagcttctcactgcagaccctctaaatggtggaggtccagcagaagct
tctcggtttctttcttcactacgtgactctgatgatgctctaccagttgccatgggtgca
atgcagttgctacccaatttacggtcaaagcaacttcttgttcacttttttttgaagcga
agagaaggaaatctctcagatgttgaggttttacggcttaactcatgggccttgggtctt
cgtgttttggctgccttgcctttgccgtggcaacaaagatgttcttcattgcatgagcac
cctcatttgatactggaggtgcttctgatgagaaaacaactgcaatctgctgctctgatt
cttaaagaatttcctgtgttgagagacaacaatataattattgcatatgctgcaaaggct
atggctgtcagtattagctctccccctagagaacatcggatatctgtttcaggagcaaga
ccaaggcagaaaacaaaggcaggcattcctccgaggtcatcttttactagcagtctaagt
aacttgcaaaaagaggctcgcagagctttttcttgggcgccacgaaatactggagacaag
gcggctccaaaagatgcttatcgtaaaagaaagagttctggtttgacttcgtctgaaaaa
gttgcttgggaggctatgactggaattcaagaggatcgtgtttcgtcatatcctgcagat
gggcaagaacggcttccttctgtttcaattgccgaggaatggatgctgacaggtgatgca
attaaggacgaatctgttcgggcatctcacaaatatgaaagtgcccctgacattacccta
tttaaggcactgctttgtctgtgttctgatgagtcggtgtctgccaaaagtgccctggac
ttgtgtattaatcagatgaagagtgtgttgagctcccaacagttgcctgagaatgcgtcc
atggaaacaattggtcgtgcatatcatgccacagagacaattgtacaggggctactatat
tgtaaatccgtgctgagaaagcttacagggagtactgaaatctccagcaattctgataga
aatagggatgctgatgatgcatcctctgatgctggtagctccagtgtgggcagtcagttc
acagatgaattatctgaagttctctcacaggtggagatctggctaggacgtgctgaactg
cttcaaagccttttgggatcagggattgctgtgtctcttgatgatattgctgataaggag
tcatctgaacgtctccgtgaccggttgagtgtaaaggagcgatacagcatggctgtatat
acttgtaaaaagtgtaagattgatgttttccctgtgtggaatgcttggggacatgctttg
atacggatggagcactatgctcaagctcgggtgaagtttaagcaagctcttcaattgtat
aagagtgatgctgcacctgtcattttagagattattaatacaatcgaaggaggtccacca
gttgatgtttcagcagttcgttccatgtatgagcatttggctaaaagtgcaccgacgata
ctggatgattctctttctgctgattcatatctcaatgttctatacatgccatccaccttt
ccacgttcagagagatctaggcgggctcaggaatctgaaaataataattcctccctcagt
tcagaatttgaagatggacctcacagcaatcttgacagtgttcgatatgttgaatgtgtg
aactatttacaagactatgcacgccagcatttgctgagttttttgtttaggcatggtcac
ttcaatgatgcttgcgtgttgttttttcctccaaatgctgttcctccccctcctcaacca
tcaatattggggggagtagcaacttcatcttcatcccctcaaaggccagatccattggct
acagattatgggacaattgatgatttgtgtgacttgtgtattggttatggtgcaatgtct
gttcttgaggaagtgatttcaacaagaatgtcatcactaaatccacaggatgtggcagta
aatcagtatacagcagcagcccttgtccgtatttgcatctattgtgaaacacataaacat
ttcaattatttatacaagtttcaggttattaaaaaggatcacgtcgctgctggactttgc
tgtattcagttgtttatgaattcttctgcacaagaggaagctatcaaacatttggaacat
gctaagatgcattttgatgaaggtttgtcagcacgacatagaggtggagattctactaag
cttgtcacaaagggcattagaggaaagagtgcctctgagaagcttactgaagagggactt
gtgaagttttctgctcgggtttcaattcagctggaagttgtgagatcctttaatgattca
gatgggccacagtggaaatattcgctttttgggaatccaaatgatcttgaaacattcagg
agaagatgtaaaattgctgagactcttgtggagaagaattttgatttagctttccaagtg
atctatgaattcagtcttcctgctgttgatatatatgctggtgttgctgcatcacttgct
gaaaggaaaaaaggcagtcaactgacagaattttttagaaatataaaaggcacaattgat
gatgatgattgggaccaggtcttgggagctgcgataaatgtttatgctaataaacacaaa
gaacgccctgaccgtctcatagacatgttaaccagcagccacaggaaggttttggcttgt
gtggtttgtggtcgtttaaaaagtgctttccaaattgcttctcgaagtggaagcgtagct
gatgttcaatatgtagcccatcaggcattacatgcgaatgcactccccgtgcttgatatg
tgtaaacaatggttggctcagtacatgtaa
DBGET
integrated database retrieval system
