Castanea sativa (European chestnut): 142613250
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Entry
142613250 CDS
T11266
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142613250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142613250
Spliceosome [BR:
csaa03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
142613250
Complex B
142613250
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
xRRM
RBD_AKAP-17A
RRM_YTH1
DUF4523
RRM_PARP14_3
RRM_10
Met_asp_mut_E
Motif
Other DBs
NCBI-GeneID:
142613250
NCBI-ProteinID:
XP_075641616
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All DBs
Position
10:complement(25976300..25982813)
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AA seq
243 aa
AA seq
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MAEINTTGTEVPPNVTIYINNLNEKIKLEELKKSLHAVFSQFGKILEVLAFKTLKHKGQA
WVVFDEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRKRHEEKGK
KKKEQHDAQAGLVNPAYAGAYGAAPPLSQIPYPGGVKSLVPEAPAPPNNILFVQNLPHET
TPMMLQMLFHQYHGFKEVRMVETKPGIAFVEYTDEMQSTAAMQALQGFKITQQNPMLITY
AKK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcagagattaatactacaggcacagaagtccctccgaacgtgactatatacattaac
aacctcaacgagaaaatcaagctcgaagagttgaagaagtctctgcacgcggtattctcg
caatttgggaagatattggaggtgctggccttcaagactctgaagcacaaaggccaagct
tgggttgtgttcgatgaagtttcctctgccaccaatgcgcttcgccaaatgcagggcttc
ccattctacgacaagcccatgagaatacaatatgcaaagacaaaatcagatgtgatagcc
aaggctgatggtacttttgtcccacgtgaaagacgtaagaggcatgaggaaaagggaaag
aagaaaaaagaacaacatgatgctcaagctggattggtgaatcctgcttatgctggagct
tatggagctgcacctccactatctcaaataccctacccgggtggtgtaaagtctttggta
ccagaggcacctgctccaccaaacaacatactgttcgtgcagaatcttccccatgagaca
actcctatgatgctgcaaatgctcttccaccaatatcatggttttaaggaagttagaatg
gtggaaacaaagccagggattgcctttgtggagtatacagatgagatgcaatcaacagct
gcgatgcaggcactccaaggtttcaagataacccaacagaatccaatgttgatcacatat
gcaaagaaatag
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