Castanea sativa (European chestnut): 142613355
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Entry
142613355 CDS
T11266
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142613355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142613355
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142613355
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Other DBs
NCBI-GeneID:
142613355
NCBI-ProteinID:
XP_075641787
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Position
10
AA seq
588 aa
AA seq
DB search
MKMMMGSSFPEEVLEHVFSFIERDKDRNAISTVCQSWYEIERWSRRRVFVGNCYAVSPLI
LIKRFPDVRCLELKGKPHFADFNLVPEGWGAYVSPWIAAASTAYPWLEEIRLKRMVISDD
SLELISKSFKNFKVLVLSSCEGFSTEGLAVIAANCRNLRELDLRESEVEDLNQSSGHWLS
HFPDNYTSLVSLNIACLNSEVSFTALERLVGRCPNLRTLRLNRAVPLDRLANLLRRAPQL
VELGTGEASDLRPDVFSNLSGAFSGCKELKSLSGFWDVAPGYLPVVYPICPRLTSLNLSY
AATIQSSDLIKLVSQCQNLQKLWVLDYIEDLGLEALAASCKDLRELRVFPSEPFGVEPNV
LLTEQGLVSVSEGCPKLHSVLYFCRQMSNDALRTIARNRPNMTRFRLCIIEPRTPDYLNH
QSLDVGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVL
SGCENLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEV
IDERGPPGSRPESCPVEKLYIYRTISGQRFDMPGFVWTKDENSVLGLS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgatgggtagttcgttcccagaagaagtgttggaacacgtgttctcattc
atagagagagacaaagacaggaacgcgatctcgaccgtgtgtcaatcgtggtacgagatc
gaacgttggagccggaggagagtgttcgtgggcaactgctacgctgtcagccccttgata
ctgatcaaacgcttcccggacgttaggtgtttggagctcaaaggtaagccgcacttcgct
gatttcaacctcgtacccgaaggttggggcgcctacgtgtccccgtggatcgcggcggct
tccacggcttatccttggctcgaagagattcggttgaagcgcatggtcatctcggacgac
agcttggaactcatttctaagtcgttcaagaactttaaggttcttgtgctttcctcgtgt
gaaggtttttcgactgaaggactggctgtcattgctgctaattgcaggaatttgagagag
ctggacttgagggagagtgaagtggaggacttgaatcagtcgagtggacattggctcagc
cactttcctgataactacacctcactggtgtcccttaacattgcctgtttgaactctgag
gtgagcttcacagccttggagcgcctggtgggtaggtgccccaacctgaggactcttcgg
ctcaatcgtgctgtgccccttgacaggcttgcaaacctacttcgtcgggcacctcagttg
gttgagttaggcactggggaagcgtctgacttgcgaccagatgttttctcgaacctatcg
ggggcattctctgggtgcaaagaacttaagagcctgtctggtttttgggatgtagcccca
ggttatcttccagttgtttatcctatctgtcctaggttaacgtcgttgaacttgagctat
gcagccactatccaaagttctgatcttatcaagctagttagccaatgtcagaatttgcag
aagttatgggtgctggattacattgaagacttgggcctagaagcccttgcagcatcttgc
aaggatctgcgagaattgagggtatttccatcagagccatttggtgtagaaccaaatgta
ttgttgacagaacagggacttgtctctgtttctgaaggctgcccaaagctgcattcagtt
ctgtacttctgccgtcaaatgtctaatgatgccttaaggaccattgccaggaatcgacct
aacatgacaaggtttcgtctttgtattattgagccacggactcctgattaccttaaccat
caatcacttgatgtgggatttggagccattgttgagcactgcaaggatctaaggcggctt
tccctttctggtctccttactgatcgagtgtttgagtacattgggacttatggcaaaaaa
ttagagatgctgtctgtggcttttgctggagatagtgatctggggctccatcatgtacta
tctggttgtgaaaaccttagaaaacttgagattagggactgcccctttggtgacaaagct
cttttggccaatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgctct
gtgagtttcggagcatgtaagctgctaggtcagaagatgccgaggcttaatgttgaggtt
attgacgagaggggccccccaggttcaagaccagaaagctgtccagttgagaagctctac
atatataggacgatctctggacaaaggtttgacatgcctggttttgtttggacaaaggat
gaaaattctgtattggggctttcctga
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