Castanea sativa (European chestnut): 142613399
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Entry
142613399 CDS
T11266
Name
(RefSeq) ATP-dependent DNA helicase Q-like 2 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142613399
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
142613399
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
142613399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
RQC
Motif
Other DBs
NCBI-GeneID:
142613399
NCBI-ProteinID:
XP_075641871
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All DBs
Position
10:2115304..2148153
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AA seq
730 aa
AA seq
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MDTGEILAELLQVEVEIQDVQDQVNMLLEQQEKLYDRQSELKALLEACKGLGDPVTDGAS
STVENWSGPFEWDSEADDIRFNVFGISAYRANQREIINSILSGRDVLVIMAAGGGKSLCY
QLPAVLRDGVALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKEEEKFIYRALEKGEGD
LKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAVDEAHCCSQWGHDFRPDYKNLGILKT
QFPNVPLVALTATATQKVQTDLMDMLHIPRCIKFVSTVNRPNLFYMVRQKSSVGKVVIDE
IAEYIQESYSNNESGIVYCFSRKECEQIAKELRERGISADYYHADMDANAREKVHMRWSN
NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGD
VPRQSSMVFYENSGLQNLYDIARYCQSKRQCRRSAFFRHFAEPLQDCNGMCDNCAFSSDV
KEVDVTRHAQLMVSLLQDVQENDQRMTMLQLIDKMKIKHKELGSELKREETEQLVIKLIL
DRILKEEFQHTAYATNAYVTLGPFAKQVLHGKKNVKLEISSGEKNTASLKSTKRSLSSSV
LEFKLDELRKEVSSIHGKIFPHSVLSTQQISVISAQKPNSLEQLEKIIGKLKTEKYGSRI
LEQIEKYRDCVQTDELNEGQGSQNRGTKLRKTKKGQTDELNGGQGSQNRGTKRRKTKKDL
VVIESSDDEA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggacactggtgagatattagcggagctgcttcaagtagaggttgagattcaagatgtc
caagaccaagtaaatatgttgcttgagcagcaagagaagttgtatgatagacagtctgaa
ctaaaggccctgttggaagcatgtaaaggattaggagaccctgttacagatggtgcttcg
tctaccgttgaaaactggtctgggccatttgagtgggattctgaagctgatgacattagg
ttcaatgtttttggcatatctgcatatcgcgcaaatcaaagggagatcattaattcaatc
ttgagtggaagagatgttctagtgattatggctgcaggtggtggcaaaagcctgtgttac
cagcttccagctgttcttcgtgatggagttgctcttgttgtcagtcctttgctttcttta
atacaggatcaggtgatgggtttgactgctttaggcattccagcatatatgttgacatca
actactagcaaggaagaagagaagttcatatacagggcgcttgaaaagggtgaaggagat
ctcaaaatattgtatgtcacaccagaaaagatatcaaagagtaaaagatttatgtcaaaa
cttgagaagtgtcatcatgctggccgtctctctctaattgcagttgatgaggcacattgt
tgtagtcagtggggtcatgactttcgacctgactataagaatcttggcatcctcaagact
cagtttcctaatgttcctttggttgctttgactgcaactgcgacacagaaggtccaaact
gatctgatggatatgctgcacattccaagatgtattaaatttgtcagcacagtcaatagg
ccgaatctcttttatatggtgcggcaaaagtcatctgttggtaaggtggtgattgatgaa
attgccgaatatatccaagaatcttattcaaataatgagtctgggatagtttattgcttt
tctagaaaggaatgtgaacagattgcaaaggagctacgagagagaggaatttcagctgat
tattatcatgcagatatggatgcaaatgctcgtgagaaagtacatatgcgatggagcaat
aacaagttgcaagttattgttggtacagtagcatttggtatgggaatcaacaaaccagat
gtgaggtttgtcatccatcacagcctgagtaaatcaatggagacatactatcaggaaagc
ggccgagctggacgagatggactcccttctgaatgcttactctacttcaggcctggtgat
gttcctaggcagagttctatggtgttctatgagaattctggactgcagaatctctatgac
attgcacgatattgtcagtctaaaagacagtgccgtcggagtgcctttttccggcatttt
gctgagccattacaggattgcaatgggatgtgtgacaattgtgcattctcaagtgacgtg
aaggaagtggatgtcactcgtcatgcacaacttatggtttctttgctgcaagatgtgcaa
gagaatgatcagagaatgacgatgttacaattgatagacaaaatgaaaataaagcacaag
gaactaggttctgaactgaagagagaggaaacagaacagcttgtcataaagcttatatta
gatcgaatattgaaagaagaatttcagcatacagcttatgccacaaatgcttacgtaaca
ttagggccatttgccaagcaagtcttacatggaaagaaaaatgtgaaacttgaaatttct
agcggagagaagaatacggctagtctgaaatcaaccaaacgcagtctttcatcctctgtt
ttggagttcaagcttgatgagcttcggaaagaagtgtcttcgatccatgggaaaatattc
cctcattctgtcctgtctactcaacaaatcagcgtgataagtgcgcagaagccaaattca
ttggaacagttggagaaaatcattgggaaattgaagacagagaagtatggaagtagaatt
cttgaacaaattgagaagtaccgcgattgtgttcagactgatgagttaaatgaagggcaa
ggaagtcaaaatagaggcaccaaactgcggaaaaccaaaaagggtcagactgatgagtta
aatggagggcaaggaagtcaaaatagaggcaccaaacggaggaaaaccaaaaaggatctc
gttgtcattgaaagcagtgatgacgaagcatga
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