Castanea sativa (European chestnut): 142613449
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Entry
142613449 CDS
T11266
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142613449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csaa03009
]
142613449
Ribosome biogenesis [BR:
csaa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
142613449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
TIP49
AAA_17
RNA_helicase
AAA_2
AAA_33
NPHP3_N
AAA_28
AAA_18
Viral_helicase1
nSTAND3
Rad17
IstB_IS21
Mg_chelatase
Parvo_NS1
TsaE
NB-ARC
ATPase_2
NACHT
ABC_tran
AAA_3
AAA_19
AAA_11
Bac_DnaA
Zeta_toxin
AAA_30
IPT
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
142613449
NCBI-ProteinID:
XP_075641925
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All DBs
Position
10:complement(840889..847027)
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AA seq
699 aa
AA seq
DB search
MKKRTRADEDEEKLELIEDSHIKSRTSADTTPQTTSSSEDSSSDGTTSTSDDDDNEFHMP
EDDGVDTSKAENKIEQMGSDNGNGERVKVEAEAQPQPQPQPQKNCNGHGNGERRIMGPRF
KDFGGIDSVIEELKMEVIVPLYHRELPRCLGVQPMSGILLHGPPGCGKTKLAQAIANETG
FPFHMISSTGIISAVSGAAEENIHQLFSRAYNTTPSILFIDEIDAIGAKRENLRDMEQRI
VSQLITCMDVLQRLYQAHAKSNSESSNTKPGYVLVIGATNRPDALDPALRMPGRFDREIA
IGVPNESGRLEILSVLARNLKLEGSFNILNLARSTPGFVGADLAALANKAGNLAMKRIID
ERKSELSKGSSINEEHSEEWWRQPWMPEEMEKLAITMADFEEAVKMVQPSSRREGFSTIP
NVKWEDIGGLDFLRKEFERYIVRRVKHPEDYEGLGLDLDTGFLLYGPPGCGKTLIAKAVA
NEAGANFIHIKGPELLNKYVGESELAVRTLFRRARTCSPCILFFDEVDALTTNRGTEGGW
IVERLLNQLLIELDGAEQRRGVFVIGATNRPEMMDRAILRPGRFGKLLYVPLPSPDERGK
ILKALARKKPIDASVDLSSIGRMEACENFSGADLGALMNEAAMVALEDRLKSSDQSTLGA
TSLTIKSTHFEQAVGQISRSVLDKQKQYYQMLSENLKAA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgaacgagagctgatgaagatgaagagaagttggagctaatagaagattca
catattaaaagtagaacgagtgcggacactactcctcaaacgacatcatcgtctgaggat
tcaagttccgatggaacaacctccacgtcagatgatgatgataatgagtttcacatgcca
gaagatgatggtgttgatactagcaaggctgagaataagattgaacaaatgggtagtgat
aatggtaatggggagagagtgaaagtggaagcggaagctcaacctcaacctcaacctcaa
cctcagaagaattgtaatggtcatggtaatggggagaggagaataatggggccgaggttt
aaggattttggagggatagatagtgtaattgaggagttaaaaatggaggtgattgtgcca
ttgtaccatagagagttaccgaggtgccttggagtccaacccatgtccgggattttgttg
cacgggccaccaggttgtggcaagaccaaattggctcaggccattgccaatgagaccggg
tttccatttcatatgattagctctactgggatcatctctgctgtctctggtgcagcagag
gaaaatattcatcagcttttctctagagcatacaacactacaccgtcaattttatttatt
gacgaaattgatgcaattggtgctaaaagagaaaatctaagagatatggagcaacgaatt
gtgtcacagttgataacttgcatggatgtacttcagagactataccaggcacatgctaag
tcaaactcagaaagttctaatacgaaacctggctatgtgcttgtaattggagctaccaat
aggcctgatgcccttgaccctgcactaaggatgcctggacgatttgaccgtgagattgct
ataggtgttccaaatgaaagtggaaggcttgagattctttctgtacttgcacgaaatctt
aaactggagggttctttcaatattctcaatctagccaggtctacgcctggttttgttggg
gctgatttggctgccctggctaacaaggccggtaaccttgccatgaagagaattattgat
gaaagaaagtctgagctatctaaaggttcttctataaatgaggagcattctgaagagtgg
tggaggcaaccatggatgcctgaagagatggaaaagcttgccatcacaatggctgatttc
gaggaagccgttaaaatggttcaaccatcatcaagaagagaaggattctctacgattcct
aatgtaaaatgggaagatatcggtgggcttgatttcttaagaaaggagtttgagcgttac
atagttagacgtgttaaacatccagaggattatgaggggcttggattggacttagataca
ggatttttactctatgggcctccaggttgtggtaaaacactgattgccaaggctgtggct
aatgaggcaggagccaatttcattcacatcaagggccctgaacttttgaataaatatgtt
ggagaaagtgagctggcagttcggacattattccgtcgtgcaaggacgtgttcaccatgc
atacttttctttgatgaggtggacgcgttgacaacaaatcgtggtacagaagggggatgg
attgttgaacggctactgaaccagttacttatagaattagatggtgcagagcagaggcgg
ggtgtctttgtcattggtgcaacaaacagacctgagatgatggaccgagccatcttacgg
cctggtaggtttggtaaacttctttatgttcctttgcccagtccggatgagcgtggaaag
atcttaaaagctcttgcaaggaagaagcctatagatgccagtgtggatttgagttctatt
gggcgaatggaggcctgtgaaaattttagtggagctgatcttggagcactgatgaatgaa
gctgcaatggttgctcttgaagacaggctgaaatcaagtgatcagagcactttgggtgca
acttctttgacaatcaaatcaacacattttgagcaagcagtgggtcaaatctcgcgttcc
gtgttagacaagcaaaaacaatactaccaaatgttgtctgagaacttaaaggcagcatga
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