Castanea sativa (European chestnut): 142613672
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Entry
142613672 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142613672 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142613672
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csaa03037
]
142613672
Membrane trafficking [BR:
csaa04131
]
Endosome - Lysosome transport
Others
Others
142613672
Cilium and associated proteins [BR:
csaa03037
]
Other cilia and associated proteins
Other cilium assembly proteins
142613672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR11_1st
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_WDR5
WD40_Prp19
ASA1
WDR55
TPR_GEMI5
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
142613672
NCBI-ProteinID:
XP_075642237
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All DBs
Position
1:78101891..78121836
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AA seq
1402 aa
AA seq
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MLSPRPPQPQPPPAAVPPVAVAASAAASPPPTQDSLDCMLPGPASRNNFGSADLSPSGLL
AFPASSSVAILDSRSLQLITTLPLPPPSSSNSSNSNSLSPFVTSVRWTPLPLRRDLLTTE
PSSSHLLLAAADRQGRIALFDFRSRSPILWFETDSASSKSGVQDLCWVQARPDSYLLAAI
SGASTLSLYNTSTGRCFFKYDAAPEFLSCLRRDPFDSRHFCVLGLKGFLLSVKVLGETED
NIVLKELHVPTDCSELQRLERDAAASASGTGNGSNSSAPASGMFPLYAVKFSFSPQWRYI
VFITFPRELVVFDLRYEASLFSSALPRGCGKFLDVLPDPNNELIYCAHLDGKLSTWRRKE
GEQVHVMCAMEELIPSIGTPVPSPSILAVIICQSDSTFQNVGKLYSDVSHSPSPDVDFDT
PFDFCDEPLLVSKTHLISISDDGKIWNWLLTAEGPENTQKDDTNLGLVVDVSEVPVPGTN
ANTVISSSSGSFTEAGKQPEHMDGGRSCPSNSTSSLADMSFKISLVGQLQLLSSTVTILA
VPSPSLTATLARGGNIPAVAVPLVALGTQSGTIDVVDVSANAIAASFSVHNGMVRGLRWL
GNSRLVSFSYSQANEKSGGYINRLVVTCVRSGLNKMFRVLQKPERAPIRALRASSSGRYL
LILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRPVQNGPSTQSSLLSRDRTAV
SSDVASTQTVASSSDSKAVSSDGSQDDSSESFAFALVNGALGVFEVQGRRIRDFRPKWPS
SSFVLSEGLITAMAYRLPHVVMGDRSGNIRWWDVTTGHSSSFSTHREGIRRIKFSPFVSG
DRSRGRIAVLFYDNTFSVFDLDSQDPLANSHLQPQFPGTLVLELDWLPLRTDKNDPLILC
IAGADSSFRLVEVNTNDKKIGYGPQSRTIKERFRPMPICAPILLPTPHALALRMILQLGV
KASWFNTCSTTLEKRPHLIPGTASYTGDLRSYMIDLPPVGDAVVPEMLLKVLEPYRKEGC
ILDDERAKLYAKVVNKGCAARFAFAAAIFGESSEALFWLQLPRALNYLINKLVNKSPQKV
PVSASTSELDDTALLKRITSKERSMPGKGKKDALCQGQLRLMAFEQEELWEAANERIPWH
EKLEGEEAIQNRVHDLVSVGNLEAAVSLLLSTPPESSYFSANALRAVALSSAVSRSLLEL
AVKVVAANMVRTDRSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAAAHLKGTDYSRV
LQRWAEHALRSEYNIWRYIFPMALLNMIFFLLICSELNMANCRALILYVGAGALQEALAA
LREAQQPDTAAMFILACREIYAEIIADLGDLDDESSSLVKDKLRNLPVLDPENEDVIAVG
ECYGQYQRKLVHLCMDSQPFSD
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcccaagaccaccgcaaccacaaccaccgccagcagcagtaccaccagtagcg
gtggcggcgtcagcagcagcatcaccaccaccaacccaagactcattggactgcatgctc
cctggcccagccagtcgcaacaacttcggatccgccgacctcagcccttcaggtctcctc
gccttccctgctagtagctccgtcgctattctcgattctcgctctcttcaactcatcacg
actctccctctcccacctcccagctcttccaattcctccaattccaattctctctctcca
ttcgtcacctccgtccgctggaccccactccctctccgccgcgacctcctgaccaccgag
ccctcctcctctcacctcctcctcgccgcggccgaccgccaaggccgcatcgctctcttc
gatttccgctccagatctcctatcctctggttcgaaaccgactccgcttcctccaaatcg
ggcgtccaggacttatgttgggtccaggcccgacccgactcgtacctcctcgctgcaatc
agcggcgcctccactctctctctttacaacacctcaaccggaagatgctttttcaaatac
gacgccgcgccggaattcctctcttgcctccgccgcgaccccttcgattcccgccatttc
tgcgtcctcggcctcaagggcttcctcttgtccgtcaaagtcctcggcgagaccgaggac
aatatcgtcctcaaggagcttcacgttccgaccgactgctctgaattgcagagattagag
agagacgccgcggcctccgcctccggcactggaaatggttcgaattcctcggcgcctgcc
tccggaatgttcccgctctatgcggtgaagttctcgttttcgccgcagtggaggtacatc
gtgttcatcacgttccccagggagttggtagtgtttgatttgcggtatgaggcatcgctc
ttctcatctgcattgcctcgtggctgcggcaagtttcttgacgtgttgccggatccgaat
aatgagttgatatattgtgctcacctggacgggaagctcagtacttggcggcgcaaagaa
ggagagcaggtgcacgtaatgtgcgcaatggaagagttgattccctcaattggcacacct
gtcccttctccttcaattcttgctgtcatcatctgccaatcagattccaccttccaaaat
gttggcaagctttattctgatgtatctcattctccttccccagatgtggattttgatact
ccttttgatttttgtgatgaacctctacttgtatctaagacgcatttaatctccatttct
gatgatggaaaaatatggaattggctattgactgctgaagggccagaaaatactcagaag
gatgatacaaacttgggcttggttgttgatgtcagtgaagtgccagttccagggaccaat
gctaatactgtaatttcttctagtagtggatctttcacggaagcaggtaagcaaccagaa
catatggatggtggcagaagctgcccatcaaactctacctccagcctggcagatatgtcc
tttaagattagcttggttggacagcttcagcttctttcttcgacggtgaccattctggct
gtaccatccccttctttgactgctactttggcccgtgggggaaacattcctgctgttgct
gttccactggttgctttaggaactcaaagcgggacaatagatgttgttgatgtttctgca
aacgccattgctgcaagtttttctgtacacaatggaatggttagaggattacggtggctt
ggaaattctagactggtctcattttcttacagtcaggcgaatgaaaaatctggaggctac
atcaataggcttgttgtgacctgtgttcgaagtggtcttaataaaatgtttcgggtttta
caaaaaccagaacgtgctcccataagagctttaagagcttcttcatccggaaggtatttg
ctaattttgtttcgtgatgctcctgtagaggtttgggcaatgacgaaaactcccattatg
cttagatcattagctcttccatttacggtattggaatggactcttccgacagttccacgg
cctgttcaaaatggaccttctacacaatcatcattattgtctagggatcgtacagctgtg
tcatcagatgtggcatctacacagactgtggcatcatcttcagattctaaggcagtgagc
tcagatggatctcaagatgactcttccgaaagttttgcatttgcactagtaaatggtgca
cttggagtttttgaggttcaagggcgaaggatccgagacttcagaccaaaatggccttct
tcttcatttgtactatcggagggattgattacagccatggcctaccgcttgcctcatgtg
gttatgggagacaggtcggggaacatacggtggtgggatgtgacaactggacattcttcc
tcatttagtactcatagagaaggaatccggcgaatcaaattctcaccatttgtatctgga
gaccgtagccgagggcgtattgctgttctattttatgacaatacattttctgtatttgat
cttgattcgcaggacccattagccaattctcatttacaacctcaatttccaggaaccctt
gtattggagcttgattggttgcctttgcgaactgataaaaatgacccattgatattgtgc
attgctggagctgatagtagctttcgccttgttgaggttaatacaaatgacaaaaaaatt
ggctatggaccccagtccagaactattaaagagagattccggccaatgcctatatgtgct
cccattctacttcctactccacatgccctggcactgagaatgatattgcaattgggcgtg
aaggcctcttggtttaatacttgcagtacaactctagagaaaagaccacacctaattcca
ggaactgcttcatacacaggagatcttcgcagctacatgattgacttaccgcctgttggt
gatgctgtggtgccagagatgctcctaaaagtattagaaccttatcgaaaagaaggctgc
atacttgatgatgagagggcgaaattatatgcgaaggtagtgaataaaggttgtgcagca
aggtttgcctttgcagctgcaatatttggtgaatcttcagaagcacttttctggctacaa
ctgcctcgtgctctcaattatttgataaataagttagtaaataagtccccacaaaaagtc
cctgtatcagcatcaacttcagagcttgatgacacagctctgctgaaaaggataacatca
aaggaaagatcgatgccaggaaaagggaagaaggatgcactttgtcaaggtcaacttagg
ttgatggcttttgaacaagaagagttatgggaagctgctaatgagcgtattccatggcat
gagaaattagagggagaagaggctattcagaatcgtgtacacgatcttgtctcggttgga
aacttagaagctgctgttagtttgttgctttcaactcctccagagagctcttacttctct
gcaaatgccctgcgtgcagttgctctttcttctgcagtgtcaaggtctcttcttgaactt
gcagtaaaggtagttgcagccaacatggtcaggactgataggtcactgtctggcactcat
cttctctgtgctgttggaaggtatcaggaagcttgttctcagctacaagatgctggatgc
tggacagatgctgctactttagctgctgcacatttaaagggaactgattattcaagggtg
ttacaaaggtgggctgagcatgctcttcgctctgaatataacatttggaggtatatattt
cctatggctctccttaacatgatattctttcttctgatttgttctgagcttaacatggcc
aattgcagggctttgattttgtatgttggagctggtgcacttcaagaggcactagcagca
cttcgtgaggcacaacaaccagacacagcagctatgttcatccttgcttgtcgtgaaata
tatgcagaaataattgctgatttgggagatttagatgatgaatctagttctttggtgaag
gataaattgcgtaacttacctgtgttggacccagagaatgaagatgtaattgcagtaggt
gaatgttatggccaataccaaagaaaattggtgcatctgtgcatggactctcaacccttc
tctgactga
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